Pairwise Alignments

Query, 309 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 60.1 bits (144), Expect = 6e-14
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 15/152 (9%)

Query: 150 QLLDAVLRLARLLDTPKDIAM---LAPLINREILYRLLRGPQGYRLYEIAVANSQSHRVS 206
           Q L  +LR   L    KD       APL+ R   Y  L+ P         V     H ++
Sbjct: 124 QQLHHLLRQDNLSQLAKDCLPYQGFAPLLER---YSYLKQP--------TVKPLGQHNLA 172

Query: 207 QAITWLNGNYEQPLRIDDLAKAVNLSVSTLHHRFKAITAMSPLQYQKQLRLQEARRLMIA 266
               W+    +QP+R++ LA+   LS +     FKA T ++P  + ++LRL++A +L + 
Sbjct: 173 LLKEWVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKL-LQ 231

Query: 267 EGLEASAAGYRVGYESPSQFSREYSRLFGAPP 298
            G   +   Y+VG+   + FS+ +   +G  P
Sbjct: 232 SGKPGTDVAYQVGFYDQAHFSKAFKATYGLSP 263



 Score = 23.1 bits (48), Expect = 0.008
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 282 SPSQFSREYSRLFGAPPLRDLARLR 306
           SP+QF R +    G  P   L RLR
Sbjct: 198 SPTQFQRHFKAQTGLTPYAWLRRLR 222