Pairwise Alignments

Query, 309 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  240 bits (612), Expect = 3e-68
 Identities = 127/281 (45%), Positives = 178/281 (63%)

Query: 22  LASIVHRHTWEDGSYGTAITTLFLNRHNTPRDFMPVLVEPALCILASGSKEVRLADEIFA 81
           LAS V  HT  +    TAI  L   R   P      +VEP++ ++  G+K + L ++ + 
Sbjct: 14  LASAVAHHTEGEEWASTAIEGLEFYRQPAPTSCAICVVEPSIALVVQGAKSMTLGEQSYR 73

Query: 82  YDPLNYLVFSVAMPVAGRIIDATPEDPNLSVRINIDPAQLTALIAEAGPMGVPSRPTSRG 141
           YD   +L+ S+ +P   ++++A+ E P L + + +D A ++ LI +A P       +   
Sbjct: 74  YDTRRFLITSLDLPAKMQVLEASEEQPYLGIVLKLDLAMMSELILQAPPHPHKDPTSEYA 133

Query: 142 MYVDRIDNQLLDAVLRLARLLDTPKDIAMLAPLINREILYRLLRGPQGYRLYEIAVANSQ 201
           M +      LLDAV RL  LLD P+ IA+LAPLI +EI +R+L   QG RL +IA   SQ
Sbjct: 134 MVLGNTTPSLLDAVQRLVALLDEPESIAVLAPLIKQEIFWRVLISEQGSRLRQIASVGSQ 193

Query: 202 SHRVSQAITWLNGNYEQPLRIDDLAKAVNLSVSTLHHRFKAITAMSPLQYQKQLRLQEAR 261
             R++++I WL  +Y+Q L +D LA    +S ST HH F+A+T+MSPLQYQK+LRL EAR
Sbjct: 194 GLRIAKSIEWLKSHYDQHLSVDGLADLARMSKSTFHHHFRALTSMSPLQYQKRLRLLEAR 253

Query: 262 RLMIAEGLEASAAGYRVGYESPSQFSREYSRLFGAPPLRDL 302
           RLM+ E ++ASAA YRVGYESPSQFSREY+RLFG PP RD+
Sbjct: 254 RLMLGENMDASAAAYRVGYESPSQFSREYARLFGNPPKRDV 294