Pairwise Alignments

Query, 441 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  305 bits (781), Expect = 2e-87
 Identities = 165/363 (45%), Positives = 239/363 (65%), Gaps = 4/363 (1%)

Query: 5   VIVVDDEASIRTAVEQWLSLSGFEVQLFSRAEECLAQLPKDFPGVILSDVRMPGLSGLEL 64
           V VVDD++SIR  +E+ LS +  + + F+ AE  L  L ++ P V++SD+RMPG+ G+ L
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 65  LAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPDALLNSLRRALDKRGLI 124
           L +V +R  +LPVI++T H D+  AV A + GA+++L KPF  D  L  + RA+      
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQE- 124

Query: 125 LENRRLHQQADHRAQLESTLLGVSRGLQTLRRQVLDLASLPVNVLIRGETGSGKELVARC 184
            + +  H+ +++ +  E  ++G +  +Q + R +  L+   ++VLI GE+G+GKELVA  
Sbjct: 125 -QRKTSHRPSENYSAPE--IIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHA 181

Query: 185 LHDFGPRAKKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYAHGGTLFLDE 244
           LH   PRA+KPF+ALN AAIP+ L E+ELFGHE GAFTGA   R G+ E A+GGTLFLDE
Sbjct: 182 LHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDE 241

Query: 245 IESMPLAQQVKLLRVLQEQKLERLGSNQSIHVDLRIIAATKPDLLEEARAGRFREDLAYR 304
           I  MPL  Q +LLRVL + +  R+G + +I VD+RI+AAT  +L +    G+FREDL +R
Sbjct: 242 IGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHR 301

Query: 305 LNVAQLRLPPLRERREDIPLLFDHFAQSAAERLGRSVEPLSGAQLGRLLSHDWPGNVREL 364
           LNV ++ +P LRERR+DI  L  HF   AA+ LG  ++ L+   +  L   DWPGNVR+L
Sbjct: 302 LNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQL 361

Query: 365 ANV 367
            N+
Sbjct: 362 ENM 364