Pairwise Alignments

Query, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas simiae WCS417

Subject, 617 a.a., Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  276 bits (706), Expect = 2e-78
 Identities = 201/578 (34%), Positives = 303/578 (52%), Gaps = 56/578 (9%)

Query: 40  DAARANQQLALYANSLHTLIERYRALPAVLALDSEMINALKGPLDTATQDLLNRKLERIN 99
           DAARA       A  L + IE+ R+LP VLA D ++  AL+   D A    LN K E + 
Sbjct: 53  DAARA--AWTSRAAVLQSEIEKQRSLPLVLASDPDLGRALESR-DPAHIAALNEKFETLA 109

Query: 100 GAAQSSTLELMDRTGLAVAASNWNLPSSYVGHNYAFRPYFSQTLSQGTGRFYAVGVTTGI 159
              ++  + L+D  G+A+AASNW    S+VG +Y FRPYF   L +     +A+G  +  
Sbjct: 110 AGTRAGVIYLLDLGGVAIAASNWRAADSFVGSDYGFRPYFRLALDERATEHFALGTVSHR 169

Query: 160 PGYFLSSAVVDEHEQFLGAMVVKLEFPELEREWAQGNDLLLVSDARGIVFIANQPGWRYR 219
           PG +++  + D     LG +VVK+EF  +E +W    +   V+DA+G+V I + P WR+ 
Sbjct: 170 PGLYIARRI-DGARGPLGVLVVKVEFETIEAQWQGFAEPTFVTDAQGVVIITSLPSWRFL 228

Query: 220 NLRPLTASDLAELKATRQYDKKHLQALETSTLQRFDENSHLMRVNGPDGSAN------YI 273
              P +A + A ++A+  ++K  L  L    ++R D    ++ V  P   A+      ++
Sbjct: 229 AEIPKSAEESARIRASLPFEKAPLTPLP---IRRADAVGTVV-VALPTSRADRANERPFV 284

Query: 274 WESLPLKAEGWTLHLLRKPQFAFEDQRNAGLAAAGSWLALVFLV-------LFLTQRWRL 326
            E+ P  A  WTLH+L   +        A +AAA    AL+          L+  +  R 
Sbjct: 285 LEAGPQPATAWTLHVLAPARVP------AAVAAAARTFALMLSTGVICGSGLWYARSLRR 338

Query: 327 ARLRQRSRE---ELEQLVEERTQALRTA---------------------QDGLVQSAKLA 362
           AR R R R    ELE+ V ERT  LR+A                     QD LVQ+ KLA
Sbjct: 339 ARERGRQRAARIELEERVSERTAELRSANDRLLTEIDERRRAEAALQDLQDELVQARKLA 398

Query: 363 ALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDDAYQALTPLDDMLTRMAALTGHL 422
            LGQ++A++AHEINQP+ A R      R+ L   + + A   L  +  +  R+ A+TG L
Sbjct: 399 VLGQIAASVAHEINQPVAAIRTFADNARIFLARAQPEGADHNLQTIATLTERIGAITGEL 458

Query: 423 KTFARKSPSGLRERLDLATVVDQSLHLLDARLRDESIGVVLDLTR-PAWVRGDAIRLEQV 481
           + FARKSPS + E + L + +D +L L+  RLR +++ + +D+      V  + +RLEQV
Sbjct: 459 RAFARKSPSRV-EPVSLRSAIDGALLLVGHRLRQQAVTLGVDIAEGDLTVAAERVRLEQV 517

Query: 482 LINLLRNALDAMVDKPRKRLEIRLHADEQLWQLTVSDSGGGIAEEHLNSVFDPFFTTKPV 541
           L+NLL+NA++A+  +    + I   AD     +TV D+G G++ + + S+F PF TTKP 
Sbjct: 518 LVNLLQNAVEALAGRRDGTIRIAAIADRARVTVTVCDNGPGLSPDVVGSLFMPFTTTKPT 577

Query: 542 GDGLGLGLAVSYAIVHELGGRLIASNRGD-GAVFTLTL 578
             GLGLGL ++  I+ E GG     N    GA FT+TL
Sbjct: 578 --GLGLGLVIAKDIIAEFGGSFTGENAASGGARFTITL 613