Pairwise Alignments

Query, 475 a.a., exonuclease I from Pseudomonas simiae WCS417

Subject, 482 a.a., exonuclease I (RefSeq) from Shewanella loihica PV-4

 Score =  461 bits (1185), Expect = e-134
 Identities = 223/435 (51%), Positives = 300/435 (68%), Gaps = 5/435 (1%)

Query: 1   MTSIFWYDYETTGINPRSDRPLQVAGIRTDLELNEIGEPVNLYCQPSDDILPHPVACAIT 60
           + SIFW+DYET G NP  DRP Q AGIRTD++LN I EPV  YC+ + D LP P A  IT
Sbjct: 18  LPSIFWHDYETFGANPAKDRPSQFAGIRTDMDLNIISEPVTFYCKQASDYLPSPEAILIT 77

Query: 61  GITPAILAEKGLAEADFMTRVHAQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE 120
           GITP +   KG+ EA+FM R++++ + P TC AGYN+LRFDDE+TRY  YRNFFDPYARE
Sbjct: 78  GITPQLANLKGMPEAEFMARINSEFSQPNTCVAGYNSLRFDDEVTRYGFYRNFFDPYARE 137

Query: 121 WQGGNSRWDLIDVIRTAYALRPEGIEWPQ-QDGRVTLKLERLTEANGIDHGQAHDALSDV 179
           WQ GNSRWD+ID++R  YALRPEGI WP+ +DG  + KLE LT+AN + H +AHDA+SDV
Sbjct: 138 WQNGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTQANNLSHDKAHDAMSDV 197

Query: 180 RATIALARRVREKQPKLYEWLFQLRSKQRVMDQVRLL--QPMVHISGRFSAERHYLGVVL 237
            ATIA+A+ ++E+QPKL+++ F LR K  V  Q+ +L  QP++H+S + SA      ++ 
Sbjct: 198 YATIAMAKLIKERQPKLFDYYFNLRKKNEVSKQIDVLNMQPLIHVSSKISALHGCTTLIA 257

Query: 238 PLAWHPRNRNALIVCDLGLDPQGLLDLDADTLRQRLYTRREDLAEGELPVPLKLVYINRC 297
           P+A H  N+NA+I  +L +D   L++L AD +R+R+YT R DLA  ELP+ LK ++IN+C
Sbjct: 258 PVAHHSTNKNAIICVNLAMDVTPLIELSADEIRERMYTPRVDLASDELPIGLKQLHINKC 317

Query: 298 PVVAPLNVLRTEDRERLHLDMNIYQERALRLTDAQEVWRDKLAAVYAEEGFASSSDPEQQ 357
           P +A    L   + +RL +D    + +  RL    E+ R+KL AV+  E     SDP+ Q
Sbjct: 318 PFIATAKTLTDGNAQRLEIDKEFARAQYKRLRQHPEI-REKLVAVFDTEHGNEISDPDLQ 376

Query: 358 LYD-GFIGDRDRRLCEQVRTAEPAQLARQQWPFDDHRLPELLFRYRARNFPDTLNSEEQQ 416
           LY  GF    D+   E +R   P  LA  +  FDD RLPE+LFRYRARN+P+TL+  EQQ
Sbjct: 377 LYSGGFFSHADKSKMEIIRHTAPQHLAALELDFDDERLPEMLFRYRARNYPETLDDTEQQ 436

Query: 417 RWQLFCQQRLSDPEW 431
           RW+ FCQ RL+DP++
Sbjct: 437 RWRTFCQSRLNDPDY 451