Pairwise Alignments

Query, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (710), Expect = 7e-79
 Identities = 174/506 (34%), Positives = 274/506 (54%), Gaps = 11/506 (2%)

Query: 128 WYKGAQSSNGSTLTEPYIDAATGKLIISVATPSTQGTQSIGVVGGDLSLQTLVDNIGALN 187
           W+ G   S   T+   + +A  G++ +        G    G+     S+  +V  + +  
Sbjct: 146 WFFGFIGSGKPTMVSMFQEA-NGEVKMFANYQLVNGNTMSGM---SKSMDDMVRLLNSFK 201

Query: 188 FGGMGYAFLVSADGKVLVHPDKNLVMKTLADVYPKNTP----KISADFSEVEANGKDNIV 243
               G+ FL +A G+V +H  K  V  +L  +Y         K   +    +  G++ +V
Sbjct: 202 IEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQGEEVMV 261

Query: 244 TFIPIKGLPSVNWDLGISVDKDKSFAMLSEFRTSAVIATFIAVVIIIALLGMLIRILMQP 303
             I I+   S++W L  +V   + FA L       ++ T     I I +   L   +  P
Sbjct: 262 ASIYIE---SMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMP 318

Query: 304 LHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEHVNE 363
           ++ + +   D+  G+GDL++R+ ++ +DE   L   FN F+E+IH SI++V+  +  +  
Sbjct: 319 INQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQV 378

Query: 364 VALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAED 423
            A  V   +  +  NS +Q ++T  V  AINQ+GA   EIA NAA A+  A+ A   A+ 
Sbjct: 379 AAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQ 438

Query: 424 GQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIE 483
           G+ VV +  +A+++L+  I  +   +E L S T  IG IL+ I  IS+QTNLLALNAAIE
Sbjct: 439 GRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIE 498

Query: 484 AARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLES 543
           AARAG+ GRGFAVVADEVRNLA RT  S +++QKMI +LQ  A+ +VS M   +  + + 
Sbjct: 499 AARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQG 558

Query: 544 VDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQEGVENL 603
           V  ++ A + L S++ RI +I   N  VATATEEQ++VV +IN +I EIN +N+      
Sbjct: 559 VAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTA 618

Query: 604 QSTLRACADLEQQAARLKQLVGSFRI 629
           +    A   L + + RL +LVG+F++
Sbjct: 619 EELADASKSLRELSGRLDKLVGNFKL 644