Pairwise Alignments

Query, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  236 bits (603), Expect = 1e-66
 Identities = 133/368 (36%), Positives = 221/368 (60%), Gaps = 10/368 (2%)

Query: 262 VDKDKSFAMLSEFRTSAVIATFIAVV-IIIALLGMLIRILMQPLHLMTRAMQDIADGEGD 320
           +D   S    ++ + S  IAT +A+V ++IA  G   +I++  +  +T  + DI DG+G+
Sbjct: 176 LDLQASEQATTQTQISVTIATLVAIVALVIAYFGP--KIIVNAIRDITDRINDIVDGDGN 233

Query: 321 LTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEHVNEVALRVVSASNSSMVNSD 380
           LT+R+ I   DE G L NAFN FV ++   +  + S T+ V++    + + S +++  S 
Sbjct: 234 LTQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTIGISY 293

Query: 381 EQANRTNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSS 440
           EQ    +++  A+N++ AA +E+A NA   + + +       +G+ ++ +++  + QLS 
Sbjct: 294 EQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQQLSE 353

Query: 441 MISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADE 500
            +  + + IE L+  + NI  +L+VI SI++QTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 354 SVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 413

Query: 501 VRNLAHRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQR 560
           VR LA RT+ S Q +Q+MIEELQ G  ++V ++      +  +V +A+   + L+ +   
Sbjct: 414 VRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNS 473

Query: 561 IGEIDGMNQSVATATEEQTSVVESINMDITEI-------NTLNQEGVENLQSTLRACADL 613
             ++  M+   ATATEEQT V E IN ++TE+       NT+ QE  + + +T   C++L
Sbjct: 474 TSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTICSNL 533

Query: 614 EQQAARLK 621
           +++ +R K
Sbjct: 534 QKEVSRFK 541