Pairwise Alignments

Query, 911 a.a., preprotein translocase subunit SecA from Pseudomonas simiae WCS417

Subject, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

 Score = 1136 bits (2938), Expect = 0.0
 Identities = 572/912 (62%), Positives = 705/912 (77%), Gaps = 12/912 (1%)

Query: 1   MFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEQMVALSDEQLRAKTQEFKARIAKGETL 60
           M   LL K+ GS+N+R ++R+ K V+ +N +E    ALSDE+L+AKT EF+ RI +GE L
Sbjct: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60

Query: 61  DKLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVATLGVYLNA 120
           D+LLPEAFA  REA KRV GMRHFDVQLIGGM LH G IAEMRTGEGKTL ATL  YLNA
Sbjct: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120

Query: 121 LSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGVVTPFQPPEEKRAAYAADITYGTNN 180
           L GKGVH+VTVNDYLA+RDA   RPL+EFLG+TVGV  P  P   K+ AY ADI YGTNN
Sbjct: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180

Query: 181 EFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSRLYTEIN 240
           EFGFDYLRDNMAF  E++ QR   FAV+DEVDSILIDEARTPLIISG AEDSS LY  IN
Sbjct: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240

Query: 241 KLIPRLEQHIEEVEGVVTKEGHFSIDEKTRQVELNEAGHQFVEEMLTQIGELAEGESLYS 300
           KLIP L++  +E       +GHF++DEK++QV L E G +FVEE+L + G + EG++LYS
Sbjct: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300

Query: 301 AHNLGLLTHVYAGLRAHKLFHRNVEYIV-QDGQVVLVDEHTGRTMPGRRLSEGLHQAIEA 359
             N+ LL HV A LRAH LF +NV+YIV  DG+VV+VDEHTGRTMPGRR S+GLHQA+EA
Sbjct: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360

Query: 360 KENLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYNLAVMVIPPNKPLA 419
           KE + IQ E+QTLAS TFQNYFRLY KLSGMTGTADTEAFEF QIY L  +VIP NKP+ 
Sbjct: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420

Query: 420 RKDFNDLVFLTAEEKYAAIINDIKDGMAQGRPILVGTATIETSEHVSNLLNKEGIEHKVL 479
           R D  D+V+ +  EK+AAII DIK  + +G+P+LVGT +IE SE +SN L K GI+H VL
Sbjct: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480

Query: 480 NAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVAALENPSPEQIAQIKA 539
           NAKFHEKEAEI+A+AG+PGA+TIATNMAGRGTDI+LGG+W+ +V  L+NP+ EQI  IKA
Sbjct: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKA 540

Query: 540 DWQKRHQAVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDSLMRIFA 599
           +W++ H  VL++GGL +I +ERHESRRIDNQLRGR+GRQGDAGSSRFYLS+ED+L+RIF 
Sbjct: 541 EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT 600

Query: 600 SDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNNEQRKVI 659
           SDR+   +++ GM  GEAIE +M++ +IEKAQRKVEGRNFDIRKQLLE+DDV N+QRKV+
Sbjct: 601 SDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVV 659

Query: 660 YHMRNTLLAADNIGETIADFRQDVLNATVSAHIPPQSLPEQWDVAGLEAALKSDFGVDLP 719
           Y +R+ L++AD+I + IA  R+DVLNA +  +IPPQSL + WD+ GLE  LK+DF + LP
Sbjct: 660 YELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLP 719

Query: 720 VQQWLDEDDHLYEETLREKLMAELLAAYNEKEEQASAEALRTFEKQIVLRVLDDLWKDHL 779
           +Q WLD D+ LYEE LRE+++ + +  Y  KE+  S   +R FEK ++L+ LD LWK+HL
Sbjct: 720 IQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHL 779

Query: 780 STMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRREDPIEE 839
           + MDHLR GIHLRGYAQKNPKQEYKRESF LF +LL+S+K D I VLS V+V++++ +E 
Sbjct: 780 AAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVER 839

Query: 840 -EARLRQEAEALAARMQFQHDEAPGLEAPEVLGEEVDVALAQTPVRNDQKLGRNELCYCG 898
            EA+ R +AE  A   Q QH  A   E  E           Q  VR+++K+GRNE C CG
Sbjct: 840 MEAQRRAQAEEAARHAQAQHASADDAEQDE---------SNQPMVRDERKVGRNEPCPCG 890

Query: 899 SGKKFKHCHGQI 910
           SGKK+K CHGQI
Sbjct: 891 SGKKYKQCHGQI 902