Pairwise Alignments

Query, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (356), Expect = 4e-38
 Identities = 97/292 (33%), Positives = 153/292 (52%), Gaps = 31/292 (10%)

Query: 388 VIRIDDITQRLS-LEEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIR--RRLSP 444
           V+ +    ++L+  +  ++QSEKM SVG LAAG+AHEINNP+G  L N+  +R    +  
Sbjct: 36  VLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFA 95

Query: 445 DLPKNLEHAQQAGIELETVNRYLQSREVPQL-------LDGIQQAGA---RAAKIVTHML 494
            L   +E +  +    E    +++ ++   L       L  ++++ +   R   IVT + 
Sbjct: 96  QLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQ 155

Query: 495 SFSRRSNRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPQLGPVPGTANE 554
           S S  S+ + A C+L   I+ A+ I  N F   +  D       RQ    L  + G A E
Sbjct: 156 SVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVD-------RQLAENLPKIKGIAPE 208

Query: 555 LEQVLLNLLKNAAQAIHLREDDSEPGRIILRT----RLNPPWAEIQVEDNGIGMSENVRK 610
           ++QVL+N+  NA+ A        E G + + T         W ++Q+ DNG G+S     
Sbjct: 209 IQQVLMNMFINASHAC------DEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLA 262

Query: 611 RTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVHSTLGQGTCFTLRLP 662
           + F+PFFTTK +G GTGLGLS+++ I+   H+G++ V S +GQGT FTL  P
Sbjct: 263 KIFDPFFTTKPVGVGTGLGLSIAFGIV-EKHQGKISVTSEVGQGTRFTLLFP 313