Pairwise Alignments

Query, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (341), Expect = 3e-36
 Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 27/273 (9%)

Query: 404 MVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQ------NIRRRLSPDLPKNLEHAQQAG 457
           ++QSEKM S+G L+AG+AHEINNP+G I  N+Q      N   ++   + + +  ++   
Sbjct: 166 LIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTA 225

Query: 458 IELETVNRYLQSREVPQLLDGIQQ-------AGARAAKIVTHMLSFSRRSNRQMAPCDLP 510
           +  E   + L+  +V  +L+   +         +R   IV ++  FS     + +  +L 
Sbjct: 226 LN-EACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANLE 284

Query: 511 ALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPQLGPVPGTANELEQVLLNLLKNAAQAI 570
             I+  ++I  N+    I  +       + +   +  V     ++ QVLLN+L NA+ AI
Sbjct: 285 NCIESTLKIINNEIKYNITLE-------KHYAANVPDVFCQPMQINQVLLNILVNASHAI 337

Query: 571 HLREDDSEPGRIILRTRLNPPWAEIQVEDNGIGMSENVRKRTFEPFFTTKEIGQGTGLGL 630
                  E    I        + EI + D G G+ E +R+R FEPFFTTK +G GTGLGL
Sbjct: 338 K-----GEGTITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGLGL 392

Query: 631 SVSYFIITNNHKGQMEVHSTLGQGTCFTLRLPL 663
           SVSY II N H G + V S +G+G+ FT+RLP+
Sbjct: 393 SVSYGII-NKHNGTISVTSEVGKGSEFTIRLPV 424