Pairwise Alignments

Query, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (364), Expect = 3e-39
 Identities = 77/213 (36%), Positives = 119/213 (55%), Gaps = 1/213 (0%)

Query: 62  LQHFITSLANIALKVMLVVNVASMIGVATTSFVAAIGAATLAIGLALQGSLANFAGGVLI 121
           +Q F  S++   + V+ ++   S IG+     +   G A + IG ALQ +L+NFA G+++
Sbjct: 341 MQDFFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMML 400

Query: 122 LLFRPFRIGDWIEAQGTSGTVDSIQIFHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPTR 181
           L++RPF +GD++ A G  G V  + + +T +RT DN+ +I+PN  +   +I N   +  R
Sbjct: 401 LIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIR 460

Query: 182 KVVFDVGVDYEADLQKAREVLLELAKD-PRVLADPAAVAVVSTLGDSSITVSLRCWTKTA 240
           +V    G+ Y  DL KA  VL ++ K  P VL  P     V TL  SSI   +R W KT 
Sbjct: 461 RVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTD 520

Query: 241 DYWDVVFMLNELARDRLKAAGIDIPFPQRVIRV 273
           DYWDV + + +  + R    GI IPFPQ+ + +
Sbjct: 521 DYWDVYWDVTKEVKLRFDREGISIPFPQQDVHL 553