Pairwise Alignments

Query, 432 a.a., porin from Pseudomonas simiae WCS417

Subject, 424 a.a., outer membrane porin from Pseudomonas syringae pv. syringae B728a

 Score =  326 bits (835), Expect = 1e-93
 Identities = 186/440 (42%), Positives = 251/440 (57%), Gaps = 34/440 (7%)

Query: 5   KWSMIALAVSAGTTQFAMASAQSDSKGFVEDSTFSINTRALYFSRDFRNNPSGPGSQSRA 64
           +  M+AL + + +   AMA  Q+DSKGFVEDS+ ++N R  Y +RDF+N+      +   
Sbjct: 5   RMGMLALGIISASQ--AMAQGQADSKGFVEDSSLNVNLRNAYINRDFKND------REDK 56

Query: 65  EETGLGFNALYQSGFTQGTIGVGVDVIGLLGVKLDSGKGRAGTG---LFPTGSDGRSQDD 121
            E G  F   + SGFTQGT+GVGVD   L G++LD GKGR+G G    F  G  G + DD
Sbjct: 57  SEWGQAFMGTFASGFTQGTVGVGVDAFALYGIRLDGGKGRSGNGGIDFFKQGDSGAAADD 116

Query: 122 YSKGGGAVKFRISDTVLKVGDQYTTAPVFASDDSRLLPELPQGISITSNEIKGLKLEGGH 181
            S+ G AVK R S+TV+K GDQ    PV   D+SRLLPE   G  ITS EI+GL++  G 
Sbjct: 117 LSRAGAAVKARFSNTVIKYGDQMPQLPVLNYDNSRLLPESYTGTLITSKEIEGLEVVAGR 176

Query: 182 FTSSVAQNQTYHDSLGLTKTDFVGGVYSFTPEFTGSLYYAKTEDYFRKYYSNLNWTHALS 241
           FT    ++    DS  L   +  G  Y FT EF+ + Y +  ED F+K Y NLN+  AL 
Sbjct: 177 FTQEARKSAEGRDSGDLKSINVYGASYKFTDEFSAAFYASDNEDVFKKQYLNLNYVFALP 236

Query: 242 DDQSFALDFNIYDTKSDGEGLQRAYKDNGLPFAERTKLDNRAFSLQGAYTIGAHTFTLAA 301
            DQS   DFN Y T+ D +            F      DN+ +SL   + +G H+FTLA 
Sbjct: 237 QDQSLTFDFNGYKTRLDKD------------FTASDARDNKIWSLAATWAVGIHSFTLAH 284

Query: 302 QKVTGDGDYGYG--------VDGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIP 353
           Q+ TGD  Y YG         DGG T++LANS   SDFN + E+S+QA Y ++++   +P
Sbjct: 285 QRSTGDMGYAYGGYRNDGGFGDGGNTIYLANSY-WSDFNGKDERSWQAAYGVDLSGLVLP 343

Query: 354 GLSFMTRYVTGSGANTATTSNGKEWERDI--EAKYVIQSGPAKDLSLRIRQATYRSSDGV 411
           GLS+   YV G   +  T  +G   ER+I  +  YV+QSGPAKDLSLR+R +  R SD  
Sbjct: 344 GLSYKAAYVRGDNIDDGTAGSGDGTEREIFSQLTYVVQSGPAKDLSLRLRNSFLRVSDDA 403

Query: 412 YYGSSSIDELRLIANYPLNI 431
              +S  +E R+  +YP+NI
Sbjct: 404 QAYNSEGNETRIFVDYPINI 423