Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (533), Expect = 2e-59
 Identities = 102/204 (50%), Positives = 143/204 (70%), Gaps = 1/204 (0%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIGRLRGTL EK PP ++++V G+GYE+++PM+ +Y LP++GE   ++TH VVREDAQLL
Sbjct: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           YGF    +R  FRE+I+ NGVGPK+ LA++S +  ++ V  V  +D S L K+PGVGKKT
Sbjct: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120

Query: 121 AERLLVELKDRFKAWEVVPSMFALVPNQP-DMPAAQVASAESDAVNALISLGYKPQEASK 179
           AERL+VE+KDR K W             P D       +A+ +A++AL++LGYKP +ASK
Sbjct: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180

Query: 180 AVSAIKDKNLSAEDMIRRALKGMI 203
           AVS +    +S+E++IR ALK M+
Sbjct: 181 AVSQVAKAGMSSEELIREALKSMV 204