Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 229 a.a., holliday junction ATP-dependent DNA helicase RuvA from Phaeobacter inhibens DSM 17395

 Score =  113 bits (282), Expect = 3e-30
 Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 29/226 (12%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIG+L G L  +   H+++DV G+GY +     T+  LP  GE + L+T +VVRED   L
Sbjct: 1   MIGKLTGRLEYRSSDHVLIDVRGVGYIVYCSDRTMATLPGTGEAVALYTDMVVREDLMQL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           YGF    ++++ R L  + GVG K++LA++ +L  + + RA++  D + +    GVG KT
Sbjct: 61  YGFPSLMEKEWHRLLTSVQGVGAKVSLAILGTLGPEGVSRAIALGDWATVKAAKGVGPKT 120

Query: 121 AERLLVELKDRFKAWEVVPSMFALVPNQPDMPAAQV------------------------ 156
           A+R++++LKD+      V +M   + +  D P   V                        
Sbjct: 121 AQRIVLDLKDKAPG---VMAMGGTIADAMDGPGLDVVESVAPVEAGKTPRKAPPKAPSGA 177

Query: 157 ASAESDAVNALISLGYKPQEASKAV--SAIKDKNLSAEDMIRRALK 200
           A+A + A++AL +LGY P +A+ AV  +A    + +  ++IR AL+
Sbjct: 178 AAASAGALSALGNLGYGPSDAAAAVAEAAATYPDANEAELIRAALR 223