Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 205 a.a., Holliday junction DNA helicase RuvA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  216 bits (551), Expect = 2e-61
 Identities = 113/205 (55%), Positives = 145/205 (70%), Gaps = 2/205 (0%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIGRLRG L EKQ P +++DVNG+GYEL++P+T+ Y LP + +P T++TH VVREDAQLL
Sbjct: 1   MIGRLRGVLIEKQAPEVLIDVNGVGYELQMPLTSFYELPELNQPTTVYTHFVVREDAQLL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           YGFI K++R  FR LI+ NGVGPKLAL ++S +   E V  V   D   L K+PGVGKKT
Sbjct: 61  YGFITKQERSLFRLLIKANGVGPKLALTILSGMTASEFVGCVERDDIVTLVKLPGVGKKT 120

Query: 121 AERLLVELKDRFKAW--EVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQEAS 178
           AERLLVE++D+ K+     V S    V      PA  V SAE DA++ALISLGYKP +AS
Sbjct: 121 AERLLVEMRDKLKSLMEASVGSEREFVLQSNYSPAPVVNSAEEDAISALISLGYKPPQAS 180

Query: 179 KAVSAIKDKNLSAEDMIRRALKGMI 203
           KAVSA   + + +E +I+ ALK M+
Sbjct: 181 KAVSAAFKEGMDSETLIKAALKSML 205