Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 224 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  120 bits (300), Expect = 2e-32
 Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 22/220 (10%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIGRL G L  +   H++LDV G+GY ++    TL  +P+ G P+ L T L+VRED   L
Sbjct: 1   MIGRLSGVLVYRGRDHIVLDVRGVGYVVQCSERTLAGMPAPGGPVALFTELLVREDLLQL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           YGF    ++++ R L  + GVG K +++++S+L VD + RA++  D  AL K  GVG K 
Sbjct: 61  YGFPTLLEKEWHRLLTSVQGVGAKASMSILSTLGVDGVGRAIALGDWGALRKAQGVGPKI 120

Query: 121 AERLLVELKDRFKAWEV------------------VPSMFALVPNQPDMPAA-QVASAES 161
           A+R++ ELKD  K  EV                  + +   + P     PA    AS ++
Sbjct: 121 AQRVVNELKD--KGPEVMAMGGTLEAALDGVIEDGMAASEGIEPPSAARPAVPSAASDQA 178

Query: 162 DAVNALISLGYKPQEASKAVSAIKDKNLSAE-DMIRRALK 200
            A++AL++LGY   EA+ AV+    +    E D+IR AL+
Sbjct: 179 GALSALVNLGYGQGEAASAVATAAGEGAVGETDIIRAALR 218