Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 208 a.a., Holliday junction branch migration protein RuvA from Bifidobacterium breve UCC2003

 Score =  114 bits (285), Expect = 1e-30
 Identities = 68/204 (33%), Positives = 121/204 (59%), Gaps = 10/204 (4%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIG L G +   +    ++DV G+GYE+ +  T L RL + G    ++T++ + +DA  L
Sbjct: 1   MIGMLTGRVESVEADTALIDVGGVGYEVRMSATDLSRLHT-GTAARVYTYMNLSQDAVTL 59

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           +GF+ +  +  F +LI+++G+GPK+A +L+S+L   +L RA++  D +AL K PG+GKK 
Sbjct: 60  HGFLDQASKKTFLQLIKVSGIGPKVAQSLLSTLTAGQLARAIADNDAAALAKAPGLGKKG 119

Query: 121 AERLLVELKDRFKAWEVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQEASKA 180
           A+++++ELK      ++  +  +    Q     AQV +     +  LISLG++ Q+A +A
Sbjct: 120 AQKIILELKGSIDLSQIEGASPSGAKVQ-----AQVDTGMEQVIEGLISLGWRQQDAQQA 174

Query: 181 VS-AIKDKNLS---AEDMIRRALK 200
           V+ A +D ++    A D + R L+
Sbjct: 175 VAEACEDNDIPTPLATDDVPRVLR 198