Pairwise Alignments

Query, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

Subject, 375 a.a., Holliday junction DNA helicase B from Synechococcus elongatus PCC 7942

 Score =  377 bits (969), Expect = e-109
 Identities = 191/328 (58%), Positives = 241/328 (73%), Gaps = 1/328 (0%)

Query: 13  PRDREEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTLIFGPPGLGKTTL 72
           P + +  +D+ IRP  LA+YIGQP +++ + + I AA+ R ESLDH L++GPPGLGKTT+
Sbjct: 38  PEESQRPEDQ-IRPQRLADYIGQPELKDVLGIAIAAAKSRQESLDHLLLYGPPGLGKTTM 96

Query: 73  ANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSPIVEEVLYPAME 132
           A ++A EMGV  + T+ P LERP D+  LL NL+P DVLFIDEIHRL  + EE+LYPAME
Sbjct: 97  ALVLATEMGVQCRITTAPALERPRDIVGLLVNLQPGDVLFIDEIHRLPKVTEEILYPAME 156

Query: 133 DFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYSTADLAT 192
           DF+LDI IG+G +AR+  + L PFTLVGATT+ G LT+PLRDRFG+VQRL FY    L  
Sbjct: 157 DFRLDITIGKGQSARTRSITLQPFTLVGATTQIGALTSPLRDRFGLVQRLRFYEVEALTD 216

Query: 193 IVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITKAVADLAL 252
           IV R+A +L  PLD  GA EIA+R+RGTPRIANRLLRRVRD+A V+A G IT A+A  AL
Sbjct: 217 IVQRTARLLNTPLDQAGAEEIAKRSRGTPRIANRLLRRVRDYAAVKAPGPITGAIAATAL 276

Query: 253 NLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQGYI 312
            L +VD  G D  DRRLL  +IE F GGPVG+++LAAA  E+  T+E+V EPYL+Q GY+
Sbjct: 277 ELYNVDPCGLDWTDRRLLSHLIENFGGGPVGLETLAAATGEDAQTVEEVYEPYLLQIGYL 336

Query: 313 MRTPRGRVVTRHAYLHFGLNIPSRLGEM 340
            RTPRGRV T  A+ H G   P   G++
Sbjct: 337 QRTPRGRVATPAAWRHLGYEPPQASGQL 364