Pairwise Alignments

Query, 153 a.a., biopolymer transporter TolR from Pseudomonas simiae WCS417

Subject, 144 a.a., biopolymer transport protein ExbD/TolR (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (288), Expect = 3e-31
 Identities = 67/146 (45%), Positives = 96/146 (65%), Gaps = 10/146 (6%)

Query: 8   RTKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDNNTQVLTI 67
           R +R+PVAE+NVVPYIDVMLVLL+IFMVTAP++ QGVKVDLP+  +E+LP D+   V+  
Sbjct: 7   RKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVDLPQGEAESLPADSKPPVVA- 65

Query: 68  SIKSDKTYYWNLGSEVDTQKQQDKALTLPAMTDAVTKIIRSGNEGGKHTQVFIRGDKAVD 127
           SI +D  YY ++GS         + L L  +   V+ I++   E      V ++ D+++ 
Sbjct: 66  SIDADGDYYLDIGS-----ASSKEVLDLEEIAVRVSAIVQLEPE----RPVVVKADRSIP 116

Query: 128 YGSVMGAMGGLQKAGVGNVGLITEAP 153
           Y  V+  M  LQKAGV +VGL+T++P
Sbjct: 117 YERVIQLMVTLQKAGVPSVGLMTDSP 142