Pairwise Alignments

Query, 353 a.a., ADP-heptose--LPS heptosyltransferase from Pseudomonas simiae WCS417

Subject, 346 a.a., lipopolysaccharide heptosyltransferase II from Vibrio cholerae E7946 ATCC 55056

 Score = 56.6 bits (135), Expect = 9e-13
 Identities = 72/332 (21%), Positives = 129/332 (38%), Gaps = 38/332 (11%)

Query: 1   MRVLVIKTSSLGDVIHALPALTDAARAIPGIRFDWVVEEGFAEIPTWHPAVDKVIPVAIR 60
           M++LVI  S +GD++ +        +  P  + D +       I    P V++ I + I 
Sbjct: 2   MKILVIGPSWVGDMVMSQSLYQRLKQQHPDAQIDVLAPAWCKPILERMPEVNQAIEMTIG 61

Query: 61  RWRKNIWQTIKSGEWRRFKQQVQSTKYDLVIDAQGLLKSAWLTRYVRAPIAGFDKNSARE 120
               N+         R    +++  +Y   I      KSA +  +   P     K   R 
Sbjct: 62  HGAFNLLGR------RAIGCELRDNRYTHAIVLPNSAKSALIPWFANIPKRTGWKGEFRY 115

Query: 121 PMAARFYSRRLAVARGQHAVERLRQLFAVALGYDLPKGLGDYGL---------------- 164
            +       +      Q+ VER      VAL +     L D  L                
Sbjct: 116 GLLNDLRPDKRVF---QYMVERY-----VALAHPKATMLADVSLEHCPRPKLVIDAIVQQ 167

Query: 165 STEKLLGLPPKKPFVLLLHGTTWD-TKHWPEAYWRELAERMGRLGVEVKLPWGNAAEKAR 223
           +  + L L   +P + L  G  +   K WP+ Y+ E+A      G +V L +G+A + + 
Sbjct: 168 AARQRLSLVSSRPVIGLCPGAEFGPAKRWPDHYYAEVARYAIEQGFQVWL-FGSAKDHSV 226

Query: 224 AERLAQGLQHAEVLPKLNLAG------VARVLASARACVAVDTGLGHLAAALDVPTISLF 277
             ++ Q L   +     NLAG         +LA+    V+ D+GL H++AA+    ++++
Sbjct: 227 TTQIQQALSEEQREYCANLAGETSLIEAVDLLAACHTVVSNDSGLMHVSAAVGCNIVAIY 286

Query: 278 GPTNPGLTGAYGKGQVHLASDFPCAPCLQKQC 309
           G ++P  T         + ++  C PC ++ C
Sbjct: 287 GSSSPKYTPPLTDKLAVVHTEIECRPCFKRVC 318