Pairwise Alignments

Query, 433 a.a., translocation protein TolB from Pseudomonas simiae WCS417

Subject, 443 a.a., TolB protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  236 bits (603), Expect = 8e-67
 Identities = 147/437 (33%), Positives = 236/437 (54%), Gaps = 10/437 (2%)

Query: 2   RNLLRGMLVVICCMAGIAAADEKNIL-VTSGSDRATPIAVVPFGWQGG--SVLPDDMAQI 58
           R+ L  M+ +   +A I  A  + ++ +T G     PIA+  FG      S +  D+  +
Sbjct: 10  RSTLGAMMALAVMVAAIPQARAELVIDITRGVREPMPIAIPVFGGTDAQSSAMGRDVVGV 69

Query: 59  VSDDLRNSGYYAPI-PKGNMISQPNQASEVVFRDWKAVGAQYLMVGNITPAG-GRLQITY 116
           VS+DL+ SG +  + P   + S PN A +  F DW+A+ AQ L+ G + P G GRL++ +
Sbjct: 70  VSNDLQGSGLFRVLDPAAYIQSLPNLAVQPQFADWRAINAQALVQGEVQPQGDGRLRVAF 129

Query: 117 TLFNVATEQQVLTGSVSGTAEQIRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVD 176
            L++V + QQV+  +     +  R ++H I+D+ ++ +TG +G F TR++YV AE     
Sbjct: 130 RLWDVFSGQQVVGRAFLTQGDNWRRVSHIIADEIYKAITGEEGYFDTRVVYV-AETGPKT 188

Query: 177 NTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRR 236
           N    L   D DGA    L      +L+PRF+P  + I Y+S+    PR+++ +I+TGRR
Sbjct: 189 NRVKKLAIMDQDGANQRNLTNGESMVLTPRFSPTAQEITYLSYYNSVPRVYLFNIETGRR 248

Query: 237 EQITNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFWG 296
           E + +F G+  AP +SPDG+++   ++ DGN +IY M++ +R+ SR+T+ P I+T P + 
Sbjct: 249 ELLGDFPGMTFAPRFSPDGNKVIMSMALDGNTEIYEMDLRTRRSSRLTNHPSIDTSPSYA 308

Query: 297 KDGSTIYFTSDRGGKPQVYKANVNGGGAERVTFIGNYNANPKLSADEKTLVMIHRQDGFT 356
            DG  I F SDRGG  Q+Y  N +G G +R++F     A P  S     +     + G  
Sbjct: 309 PDGRQITFNSDRGGAQQIYVMNADGSGVQRISFGDGRYATPVWSPRGDLIAFTKLKGG-- 366

Query: 357 NFRVAAQDLQRGTVKILTDTNLDESATVAPNGTMVIYATRQ-QGRGVLMLVSINGRVRLP 415
            F + A        KILT+  L E  T APNG ++++  +   GR  L  + + G     
Sbjct: 367 RFFIGAMRPDGSGEKILTEGFLVEGPTWAPNGRVLMFFRQDPNGRTTLHSIDVTGYNERQ 426

Query: 416 LPTAQGEVREPSWSPYL 432
           + T   E  +P+WSP L
Sbjct: 427 ISTPT-EASDPAWSPLL 442