Pairwise Alignments

Query, 502 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

 Score =  345 bits (886), Expect = 2e-99
 Identities = 201/517 (38%), Positives = 316/517 (61%), Gaps = 26/517 (5%)

Query: 1   MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEM-VPPNVYIDAPTLSADVLEELRDALFS 59
           MR+ V   DR+G+T+E+L +L  ++++L  +E+ V   +Y++ P +  +   EL   +  
Sbjct: 1   MRLEVLCEDRLGLTRELLDILASKSIDLRGIEIDVIGIIYLNCPDIDFETFSELMAEIRR 60

Query: 60  VQGVQAVKVVDILPGQRRHLQLDALLAAMTDPVLALDSAGKILLANPALIALYGREPA-- 117
           + GV+ V+ +  +P +R + +L +LL  + D VLA++  G + +AN A  AL+ RE +  
Sbjct: 61  IPGVKDVRKIQFMPIERHNTELISLLNNLPDAVLAINLKGAVDMANHAAAALFNREESSM 120

Query: 118 -GESISELFNDPALLDTLLEQGFRLPLRE-ISVNGQTLLLDATPI---------TDAGAL 166
            G+ IS L   P    T   +G +  LRE + ++G   +++  P+         T A A+
Sbjct: 121 IGQQISALM--PVFNFTRWLEGSKSRLREDVVLDGLDYVMEIMPVYISSDAKQSTLASAM 178

Query: 167 LTLYQPNRIGEQLSALHHDHAEGFDALLGESPVIRTLKARAQRVAALDAPLLIQGETGTG 226
           + L   N      + +      GF+  +G S   ++L ++A+++A LD PLLI+GETGTG
Sbjct: 179 MMLRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTG 238

Query: 227 KELVARACHAISARHSAPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLMELAN 286
           KE++A+ACH  S R SAPFL L+CA++P+++AE+ELFG+APG+F   Q  G  G+ E AN
Sbjct: 239 KEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQQ--GHKGIFEQAN 296

Query: 287 QGTVFLDEIGEMSPYLQAKLLRFLNDGSFRRVGGDREVKVNVRILSATHRDLEKMVSEGT 346
            GTVFLDEIGEMSP+LQ KLLRFL DG+FRRVG + E+ V+VR++++T  +L  +     
Sbjct: 297 GGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRR 356

Query: 347 FREDLFYRLNVLNVEVPPLRERGQDILLLARYFMQQACAQIQRPVCRLAPGTYPALLGNR 406
           FREDLFYRLNVL + +PPLRER  D+  L   F+ + C ++     +L       L   +
Sbjct: 357 FREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQ 416

Query: 407 WPGNVRQLQNVIFRAAAICESSLVDI-----GDLDIAGTSVARQSDGEIDSLEQAVEDFE 461
           WPGN+RQL N++ RA    E  ++ I       +D   ++ +   DG +D +   ++++E
Sbjct: 417 WPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSVSSAPSINLDGSLDDI---MKEYE 473

Query: 462 RNLLETLYTSYPSTRQLASRLQTSHTAIAHRLRKYGI 498
             +L+ L+ S+PS+R+LA RL  SHT+IA++LR YGI
Sbjct: 474 SQVLDRLFQSFPSSRKLAKRLNVSHTSIANKLRDYGI 510