Pairwise Alignments

Query, 502 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 525 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  368 bits (945), Expect = e-106
 Identities = 210/515 (40%), Positives = 310/515 (60%), Gaps = 18/515 (3%)

Query: 1   MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEMVPPN---VYIDAPTLSADVLEELRDAL 57
           MRI V   +R+GI +++L LL    +N+   E+   +   +Y+  P L     + LR   
Sbjct: 1   MRIKVHCQNRIGILRDILDLLVAYGVNVARGEVGGEHGDAIYLHCPNLINLQFQALRPKF 60

Query: 58  FSVQGVQAVKVVDILPGQRRHLQLDALLAAMTDPVLALDSAGKILLANPALIALYG---R 114
            ++ GV  VK V ++P +RRH++L+ALL A+  PVL++D  G I+ AN A   L G    
Sbjct: 61  EAITGVFGVKRVGLMPSERRHMELNALLGALEFPVLSIDMGGAIVAANRAAAQLLGVRVD 120

Query: 115 EPAGESISELFNDPALLDTLLEQGFRLPLREISVNGQTLLLDATPITD--------AGAL 166
           E  G  +S    D  L + +     R+    + V G   L D  P+          AGA+
Sbjct: 121 EVPGMPLSRYAEDFDLPELVRASQSRINGLRVKVCGDVFLADIAPLQSEHDDSEAMAGAV 180

Query: 167 LTLYQPNRIGEQLSALHHDHAEGFDALLGESPVIRTLKARAQRVAALDAPLLIQGETGTG 226
           LTL++ +R+GE++  +      GFD++   S V+  +   A+R+A LDAPLLI+GETGTG
Sbjct: 181 LTLHRADRVGERIYHVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTG 240

Query: 227 KELVARACHAISARHSAPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLMELAN 286
           KEL+ARACH  S R  +P +ALNCA L E++AE ELFGY PGAF GA+  G+ GL+EL  
Sbjct: 241 KELLARACHLASPRGQSPLMALNCAGLSESMAEIELFGYDPGAFEGARAEGRLGLLELTA 300

Query: 287 QGTVFLDEIGEMSPYLQAKLLRFLNDGSFRRVGGDREVKVNVRILSATHRDLEKMVSEGT 346
            GT+FLD +GE+S  +QAKLLRF+ DGSFRRVG D ++ ++VR++ +T  DL ++ ++G 
Sbjct: 301 GGTLFLDGVGELSARMQAKLLRFIQDGSFRRVGSDEDMFLDVRVMCSTQVDLSELCAKGM 360

Query: 347 FREDLFYRLNVLNVEVPPLRERGQDILLLARYFMQQACAQIQRPVCRLAPGTYPALLGNR 406
           FR+DL++RLNVL++ +PPLR+    +  L  +F+ QA  QI   +  ++P     L    
Sbjct: 361 FRQDLYHRLNVLSLHIPPLRDCLDGLEPLVEHFLDQASRQIGCALPGISPAAIKRLGQYH 420

Query: 407 WPGNVRQLQNVIFRAAAICESSLVDIGDLDIAGTSVARQSDGEID---SLEQAVEDFERN 463
           WPGNVRQL+NV+F+A ++C+   V    + +    + RQ   E+     L   +  FE++
Sbjct: 421 WPGNVRQLENVLFQAVSLCDGGKVQAEHIRLPDYGM-RQGLSEVSLEGGLGAIIGRFEKS 479

Query: 464 LLETLYTSYPSTRQLASRLQTSHTAIAHRLRKYGI 498
           +LE LY  YPS+RQL  RL  SHT IA++LR Y +
Sbjct: 480 VLEQLYAQYPSSRQLGKRLGVSHTTIANKLRDYEV 514