Pairwise Alignments

Query, 475 a.a., amino acid APC transporter from Pseudomonas simiae WCS417

Subject, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (315), Expect = 2e-33
 Identities = 103/392 (26%), Positives = 183/392 (46%), Gaps = 23/392 (5%)

Query: 1   MSQPAQKLRLSALIALVVGSMIGGGIFSLPQNMAARAEVGAVLI-GWAITAVGMLTLAFV 59
           MS  A+K+ L A   +V G+M+G GI  LP  +A+   VG++ I  W I  VG L+LAFV
Sbjct: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLAS---VGSISIYSWLICIVGALSLAFV 57

Query: 60  FQTLANRKPELDSGVYAYAKAGFGDYMGFSSAWGYWISAWMGNVGYFVLLFSTLGYFFPI 119
           F  LA + P+ + G  AYA        GF +   Y+ + W+GN+   +   S L  FFP+
Sbjct: 58  FARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPV 115

Query: 120 FGQGNTPVAIGCASLL-LWAVHFLVLRGIKEAAFINQITTVAKIVPLLMFIVIAGVAFKA 178
               N P+  G A++  +W    + L G    + +  I  V  ++P++   +     F +
Sbjct: 116 L---NNPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDS 172

Query: 179 EIFTRDIWGVGNPNMGNVVDQVRNMMLVTVFVFIGIEGASVYSARAEK-RSDVGRATVIG 237
            +++++ W V   + G+ V      +L+ ++ F+G+E A+V S   E  +  V  AT++G
Sbjct: 173 ALYSQN-WNVSAGSDGHAVITA---VLICLWSFVGVESAAVSSGMVENPKRTVPLATMLG 228

Query: 238 FLGVLALLVLVNVLSLGIMSQPQLAQLQNPSLAGVLEHIVGPWGAMAISIGLAVSLLGAL 297
             G+  L+ +++   +  M             A     + G W A  +S   A++   +L
Sbjct: 229 -TGLAGLIYVLSTQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSL 287

Query: 298 LSWALLCAEILYATAHDKTMPAFLKKENANQVPVNALWLTNVMIQVFLVITLFSHS---- 353
            SW +L  E     A+D   P    + + N VP   L + + M+ + +++ +F  S    
Sbjct: 288 GSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAH 347

Query: 354 ---TYTTLIYLASSMILVPYLWSAAYAVLLSG 382
               +  L   A  + ++PY +S+   +   G
Sbjct: 348 ASDLFNQLTTDAVLLTMLPYFYSSINLIRFEG 379