Pairwise Alignments

Query, 225 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (388), Expect = 2e-42
 Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 6/227 (2%)

Query: 3   ELLLIDDDQELCELLTSWLSQEGFQVRACHDGLSARKALADSAPAAVVLDVMLPDGSGLE 62
           ++L++DDD  L  LL  +LS++GFQVR+  +G    + L       +VLD+MLP   GL 
Sbjct: 6   KVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLS 65

Query: 63  LLKQLRNDHPELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR--- 119
           + ++LRN +  +P+LML+A+G+ +DRI+GLE+GADDYL KP +PREL AR++AVLRR   
Sbjct: 66  ICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVI 125

Query: 120 ---SHPAAVSTQLELGDLCFSPVRGVVSIDEQEFALTVSESRLLEALLRQPGEPLDKQEL 176
                P+A  T +E G+   +     +   E+   LT  E  +L+AL+    EPL + +L
Sbjct: 126 EAPGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSRDKL 185

Query: 177 AQIALGRKLTLYDRSLDMHVSNLRKKIGPHPDGRPRIVALRSRGYYY 223
             +A GR+ +  +RS+D+ +S LR+ +   P     I  +   GY +
Sbjct: 186 MNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVF 232