Pairwise Alignments

Query, 225 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  180 bits (456), Expect = 2e-50
 Identities = 103/224 (45%), Positives = 139/224 (62%), Gaps = 5/224 (2%)

Query: 1   MSELLLIDDDQELCELLTSWLSQEGFQVRACHDGLSARKALADSAPAAVVLDVMLPDGSG 60
           M+ +LLIDDD EL  LLT  L  EGF++   +DG +   A++D     ++LDVM+P  +G
Sbjct: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSDEIDL-ILLDVMMPKLNG 59

Query: 61  LELLKQLRNDHPELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRRS 120
           +E LK+LR      PVLML+A+GE +DR++GLELGADDYL KP   REL AR+RA+LRR+
Sbjct: 60  METLKRLREKWAT-PVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRT 118

Query: 121 HPAAV---STQLELGDLCFSPVRGVVSIDEQEFALTVSESRLLEALLRQPGEPLDKQELA 177
                   S  +E  D+   P +       Q   LT +E  LL   ++ PG  L K+ L+
Sbjct: 119 QNGLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLS 178

Query: 178 QIALGRKLTLYDRSLDMHVSNLRKKIGPHPDGRPRIVALRSRGY 221
              LG+ L  +DR++DMHVSNLRKK+   PDG+ RI  LR RGY
Sbjct: 179 IEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGY 222