Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 355 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  119 bits (299), Expect = 9e-32
 Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 28  LFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGNPAIGLNMGKVVRPASFHVAGYAL 87
           L +++GLD A L DPD R      ++LW R      +   G++  ++ R  SF     + 
Sbjct: 45  LLEKIGLDPACLQDPDGRMDVRDYSQLWLRLARHFDDEFFGMDPRRL-RSGSFVFLSRSC 103

Query: 88  MSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGYALILTVHGDHLPPTRQSAEASLASA 147
           +   TL +  +  + +  +  E+  L  +L+       + +   +  P R     +    
Sbjct: 104 LQQPTLEKALVHALEFLGLGLEN--LRGKLIRSQSLAEVVLRERNAEPARAFCYFTFWML 161

Query: 148 L-ALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAFHAPLEFNAPYDALIFERADMDAPLP 206
           L  L  WL GR +    V L+  +P     Y+  F   L F  P   +IF    +D P+ 
Sbjct: 162 LHGLACWLVGRRIPLLAVELRCAEPDYTDDYRVMFSDNLRFGRPSTRIIFAAEVLDLPIR 221

Query: 207 TANEAMALLHDRFAGEYLARFSE-SRVTHKARQVLCRLLPQGEPKREVVAQALHLSQRTL 265
            +   +           L R+ + S +  + +Q L  L  +  P  E +AQ L +S  TL
Sbjct: 222 RSEAELRAFLAEAPANILVRYRDHSSLASRIKQHLRSLPAERWPDSETLAQTLCISASTL 281

Query: 266 QRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMTLLEIAYLLGFADPSNFFRAFRRWFDAT 325
           +RRL E G  +Q + D  R+E+A ++LA  +++  EIA  LGFAD S+F++AFR+W    
Sbjct: 282 RRRLAEAGQPYQAIKDGLRQEMATEWLADAAISYGEIAERLGFADVSSFYKAFRKWTGIN 341

Query: 326 PGEYRARLL 334
           PG YR  +L
Sbjct: 342 PGHYRNLIL 350