Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 330 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

 Score =  193 bits (490), Expect = 6e-54
 Identities = 123/335 (36%), Positives = 174/335 (51%), Gaps = 7/335 (2%)

Query: 1   MSERTTSASWAMGIVKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVE 60
           M E ++ ASW   + K L   G+D  AL +  G+D   LS+P A+F  D    LWQRAV+
Sbjct: 1   MPEPSSLASWTPALRKQLTALGMDSDALCQSAGIDLNLLSEPGAQFSPDVTAALWQRAVQ 60

Query: 61  LSGNPAIGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPE 120
            S +PA+GL + + V P +FH  GY L++S +L E F R+VRY+ +  +S +L FR V E
Sbjct: 61  ASLDPALGLRVSRFVSPTAFHALGYTLVASGSLREVFERIVRYRSMAEDSLELDFRTVGE 120

Query: 121 GYALILTVHGDHLPPTRQSAEASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYKQA 180
            Y            P  +  +A  A  +  C    GR   P  V LQ   P D  P+   
Sbjct: 121 RYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYAPLAVHLQRPAPDDPRPWHDL 180

Query: 181 FHAPLEFNAPYDALIFERADMDAPLPTANEAMALLHDRFAGEYL-ARFSESRVTHKARQV 239
           F +P+ F A  + L F+    D+ L   +  + L      G+ L +   E RV    R  
Sbjct: 181 FRSPVMFAAQENLLEFDGDQFDSHLD--DGPVQLNGQESQGDPLPSLIWEQRV----RSA 234

Query: 240 LCRLLPQGEPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMTL 299
           +  LLP GEP    +A+ALHLS R LQR L +EG  +  LL+  R+ LA  ++     +L
Sbjct: 235 IETLLPDGEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSL 294

Query: 300 LEIAYLLGFADPSNFFRAFRRWFDATPGEYRARLL 334
            EIAYLLGF+D     RAF+RW   TP +YR+ ++
Sbjct: 295 SEIAYLLGFSDTDCLSRAFKRWTGLTPEQYRSSVV 329