Pairwise Alignments

Query, 683 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 677 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  372 bits (955), Expect = e-107
 Identities = 228/681 (33%), Positives = 360/681 (52%), Gaps = 19/681 (2%)

Query: 8   SLSVKLLRVVLLSALIVGVTLSVAQIIFDAYKTRQAVAGDAQRILDMFRDPSTQAVYSLD 67
           SL+ K   +V+ SAL   V + + ++       RQ +    + +LD    P+  AV++LD
Sbjct: 7   SLTWKQTTLVVFSALFFAVAIFIVEVALVGVSARQQLMVAQEELLDSIEQPAANAVWALD 66

Query: 68  REMGMQVIEGLFQDDAVRMASIGHPNETMLAEKSRALQQSPS-RWLTDLILGQ----ERT 122
             +  Q +EG+ + + V  A I   + +M    +     +P  R L++ + G      RT
Sbjct: 67  DNLATQTLEGVLKVEHVGEAVIELDDGSMFVSMNNPFTDNPLVRKLSEKLFGDLKQISRT 126

Query: 123 FTTPLVGKGPYSEYY-GDLSITLDTGTYGQGFIVNSVIIFIAGVLRALAMGLVLYLVYHW 181
              P   +G   +   G L+I  +T              F+A + RAL + + L +++H 
Sbjct: 127 LYRPSFFEGTEKQQIIGTLTIFYNTQELTDSLFSQLRFSFLATLARALLVTMALSIIFHR 186

Query: 182 LLTKPLSRIIEHLTSINPDRPSEHKIPQLKGHERNELGLWINTANQLLESIERNTHLRHE 241
            LTKP+++I E +  I+P+ P E+ +P    H+ +ELGL  +  NQ+L           +
Sbjct: 187 FLTKPIAQISEAIDKIDPELPDENLLPTSTAHQDDELGLVTSKFNQILIQFG-------Q 239

Query: 242 AESSLLRMAQYDFLTGLPNRQKLQEQLDKILIDAGRRQRRVAVLCVGLDDFKSVNEQFTY 301
            +S L RMA  D LTGLPNR  L E +   +  A   + +  +L + LD FK+VN+   +
Sbjct: 240 TQSKLRRMATRDPLTGLPNRTLLLETIAVSIQRARVHKHQFTMLFIDLDRFKNVNDSLGH 299

Query: 302 QAGDKLLLALADRLRAHSGRLGALARLGGDQFALVQADIDQPYEAAELAQSILDDLEAEF 361
             GD+ L  +A  L    G  G +ARLGGD+F ++  D   P +AA+    +L  L    
Sbjct: 300 ALGDQFLARIARVLERVVGDRGTVARLGGDEFVILAEDARTPDQAADFVDKLLMQLNVPL 359

Query: 362 ALDHEGIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMRR 421
            L+   I   A++GI+++P+DG S E L++ A+  M  AK    N++ F+   +      
Sbjct: 360 QLNEHTIHPAASVGISIYPDDGLSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAV 419

Query: 422 RRELEKDLRDALSRDQFHLVYQPQISYRDHHVVGVEALIRWQHPEHGLVPPDLFIPLAEQ 481
           R   E  L DAL  ++F L +QP+ + +   V+  EALIRW+  +  L+ P  FIP+AE+
Sbjct: 420 RLRTEASLHDALKNNEFLLHFQPKFNIKTGKVIACEALIRWK-KDGRLISPMSFIPVAEE 478

Query: 482 NGTIIPIGEWVLDQACRQLREWHDMGFSELRMAVNLSTVQLHHTELPRVVNNLMQIYRLP 541
            G IIP+G WV+++ACR L+ W       + +AVN+++ Q     L   +  L   Y++ 
Sbjct: 479 TGIIIPLGRWVIEEACRTLKHWRKRYNYAIPIAVNVASQQFADASLVPDIKQLALRYQID 538

Query: 542 PRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKID 601
           P  LE+E+TET LM DI  A   L  L+ +G  IA+DDFGTGYSSLSYL+ LP+  +KID
Sbjct: 539 PSLLEVEITETSLMNDIELAIHKLEQLKGAGFGIAVDDFGTGYSSLSYLRHLPITTMKID 598

Query: 602 KSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIISEGCHEGQGYHYSK 661
           + FV DL    +++ I   I+ LGK L + ++AEG+E  +Q  ++    C  GQG++YS+
Sbjct: 599 RCFVTDL---PNESAIASTILMLGKQLNLHIVAEGIENEQQLNWLKQMDCEIGQGFYYSQ 655

Query: 662 PLQARELAAFLKQSERNNAAI 682
           PL   E     +    NNA+I
Sbjct: 656 PLDISEFEN--RYIAPNNASI 674