Pairwise Alignments

Query, 897 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  389 bits (998), Expect = e-111
 Identities = 205/558 (36%), Positives = 334/558 (59%), Gaps = 4/558 (0%)

Query: 335  NRRTATSALHLFQRAVEQSANAFLLVNCDGVVEYVNPSFTAITQYSAEEVHGHRLAQLPA 394
            +R+ A + L L  + +     A ++   D  +  VNP+F+ IT ++ E+V G     L  
Sbjct: 932  SRKNAENELRLSAQVLASMNEAVVVGGLDYRIASVNPAFSLITGFNPEQVQGKHFLFLTH 991

Query: 395  LENLSELLFDAPSSLAKSNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYED 454
                  +       L ++  W GE K R ++       L I++V     E +H++ ++ D
Sbjct: 992  DRKQRHIYEAIEQQLLRNKHWAGELKIRTRDQRAILIWLEINQVLDSKAEASHFVAVFTD 1051

Query: 455  ITQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERFARD--SDSPISLLLVDIDNFKRI 512
            IT  K A++ +  LA  D LTNL NR  F   LD   A+   + + ++LL +D+D FK I
Sbjct: 1052 ITDRKKAEEDLRLLASYDPLTNLPNRTLFQDRLDHALAQAHRTGNMVALLFLDLDRFKHI 1111

Query: 513  NDSLGHQTGDKLLISLARRLRNSLSTGGSLARFASNEFAVLLDDT-DLESGQQVASQLLA 571
            NDS+GH  GD LL ++A RL+N +  G ++AR   +EF ++L+     ++   +A +L+ 
Sbjct: 1112 NDSMGHHIGDLLLKAVAHRLQNCVREGDTVARLGGDEFTIILEGVAKTKAATVIAEKLIR 1171

Query: 572  TLDKPMFVDNQLISVTGSVGLACAPLHGRDPQTLMRNAGLALHKAKANGKHQVQVFTEAL 631
                P  +++Q ++++ S+G++  P+   D  +L++ A  A++ AK+ G++  Q +T  L
Sbjct: 1172 AFQTPFILEDQALNISPSIGISLYPMDASDSTSLVKYADTAMYHAKSLGRNNFQFYTLRL 1231

Query: 632  NAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGMEALLRWNHPEKGMIRPDQF 691
            N  A   + +E  +++A+ + EL + +QPK  +  G + G EALLRWN  E G I P +F
Sbjct: 1232 NEYAMRHVQLEAGIKQAIVRQELSLVFQPKFRVSDGSITGFEALLRWNSKELGPISPAEF 1291

Query: 692  ISVAEETGLIIPIGKWIARQACRMSKQLSASGMGNLQVAINLSPKQFSDPDLVASIASIL 751
            I +AEE G+I  +G W+  +ACR   Q +A+G  +L VA+NLS +Q    D++++I   L
Sbjct: 1292 IPLAEEIGIINQLGHWVVNEACRHMAQFAAAGFDDLHVAVNLSARQLK-ADILSTIEVAL 1350

Query: 752  KEEQLPANLLELELTEGLLLEATEDTRLQLDQLKSLGLTLAMDDFGTGYSSLSYLKKFPI 811
                LPA  LELELTE +++++ +++   L +LK+LG++LA+DDFGTGYSSL+YLK+FP+
Sbjct: 1351 AVAGLPAKCLELELTESMIMKSPQESVAVLQRLKALGVSLAVDDFGTGYSSLAYLKRFPL 1410

Query: 812  DIIKIDRSFIHEIPDNQDDMEITSAVIAMAHNLKLKVVAEGIETAEQLAFLRRHRCDVGQ 871
            D +KIDR F+ +I  + DD  IT A+IA+AH+L+L VVAEG+E   QL  LR+H CD  Q
Sbjct: 1411 DTLKIDREFVRDISTDPDDAAITGAIIALAHSLELNVVAEGVENEAQLEHLRKHGCDQVQ 1470

Query: 872  GYLFDRPIPGAELLAMLK 889
            G+L  +P+   + +A+LK
Sbjct: 1471 GFLLGKPMAARDAMALLK 1488