Pairwise Alignments

Query, 897 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1061 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  406 bits (1043), Expect = e-117
 Identities = 228/556 (41%), Positives = 317/556 (57%), Gaps = 3/556 (0%)

Query: 336  RRTATSALHLFQRAVEQSANAFLLVNCDGVVEYVNPSFTAITQYSAEEVHGHRLAQLPAL 395
            R+ + +AL    RAVEQS  + ++ +  G +EYVNP F   T Y + EV G     L + 
Sbjct: 499  RKASEAALRKLSRAVEQSPASVIITDARGTIEYVNPQFEKSTGYRSWEVIGANPRILKSG 558

Query: 396  ENLSELLFDAPSSLAKSNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDI 455
                    +   +L +   W+GE  +RRK+   YW   S+S V       TH + + EDI
Sbjct: 559  HIAEATYAEMWKTLNEGREWRGELHNRRKDGTLYWEYASLSPVKDRRGRTTHLLAVKEDI 618

Query: 456  TQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERF--ARDSDSPISLLLVDIDNFKRIN 513
            T  K  + R+ R A  D LT+L NR      L E    A  + S + +L +D+D+FK +N
Sbjct: 619  TARKETENRLIRQANFDELTDLPNRSLCYSRLKEAIVEAEATASIVGVLFIDLDHFKNVN 678

Query: 514  DSLGHQTGDKLLISLARRLRNSLSTGGSLARFASNEFAVLLDDTD-LESGQQVASQLLAT 572
            DSLGH  GDKLL ++A+RLR     G +L+R   +EF +LL D +  E+G  VA  +L  
Sbjct: 679  DSLGHAVGDKLLTAVAQRLREVARPGDTLSRQGGDEFLMLLPDLNGSEAGHGVAQAILTA 738

Query: 573  LDKPMFVDNQLISVTGSVGLACAPLHGRDPQTLMRNAGLALHKAKANGKHQVQVFTEALN 632
            L  P  +D + I +  S+G+   P  GR    L+RNA  A++ AK +G++ +  F+  + 
Sbjct: 739  LAPPFSIDGREIYMAASIGITFFPRDGRSAAELLRNADSAMYTAKESGRNAICFFSPEME 798

Query: 633  AEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGMEALLRWNHPEKGMIRPDQFI 692
              A+ +L +E  LR+AL   EL V YQP +     R +G EALLRW  P  G + P +FI
Sbjct: 799  IRAAQRLAIEGALRQALAHEELRVAYQPLVRTSDARPIGAEALLRWTSPTLGEVSPTEFI 858

Query: 693  SVAEETGLIIPIGKWIARQACRMSKQLSASGMGNLQVAINLSPKQFSDPDLVASIASILK 752
             VAEETGLI+PIG W+  QA   + +L A G G  Q+A+N+S +QF   DL   ++  LK
Sbjct: 859  KVAEETGLIVPIGAWVLDQAVAEAARLRAEGYGAFQIAVNVSVRQFRGGDLAGLVSDTLK 918

Query: 753  EEQLPANLLELELTEGLLLEATEDTRLQLDQLKSLGLTLAMDDFGTGYSSLSYLKKFPID 812
                PA  LELELTE LLL+ T      L  L +LG+ L++DDFGTGYS+LSYLK FP D
Sbjct: 919  RHDFPAAGLELELTESLLLDVTPAITTTLQSLSALGVRLSLDDFGTGYSALSYLKTFPFD 978

Query: 813  IIKIDRSFIHEIPDNQDDMEITSAVIAMAHNLKLKVVAEGIETAEQLAFLRRHRCDVGQG 872
            I+K+DRSFI +I    D   +  A+IAMA  L L  + EG+ET EQ AF R   CD+ QG
Sbjct: 979  ILKVDRSFIRDISSAPDSGALARAIIAMARGLGLATIVEGVETEEQCAFARAEDCDIMQG 1038

Query: 873  YLFDRPIPGAELLAML 888
            +LF + +  A+L  ML
Sbjct: 1039 FLFGKAMTPADLRRML 1054