Pairwise Alignments

Query, 897 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  399 bits (1024), Expect = e-115
 Identities = 231/574 (40%), Positives = 336/574 (58%), Gaps = 5/574 (0%)

Query: 320 AGELADQFAQVINNHNRRTATSALHLFQRAVEQSANAFLLVNCDGVVEYVNPSFTAITQY 379
           AGE A     +++  N+      L L  +  E ++ A ++ +    V  VN +F  IT +
Sbjct: 259 AGEPAGLIGYLVDITNQLEREEKLRLHAKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGF 318

Query: 380 SAEEVHGHRLAQLPALENLSELLFDAPSSLAKSNSWQGEFKSRRKNLEPYWGQLSISKVY 439
           S  EV     A L    +   L  +   +LA S +WQGE   RRKN + Y   +SIS V 
Sbjct: 319 SEAEVRMSLPALLQPTRDDPNLAAEIQVALASSGAWQGELWDRRKNGDTYPVWVSISSVK 378

Query: 440 GDNRELTHYIGIYEDITQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERF--ARDSDS 497
                L+HY  ++ DI++ K A+++I RLAY D LT L NR      L++    A+ + +
Sbjct: 379 NTRGILSHYFLVFSDISERKEAERQIYRLAYYDALTGLPNRSLLFSLLEQALIEAQRNQT 438

Query: 498 PISLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLSTGGSLARFASNEFAV-LLDD 556
             ++L VD+D FK INDS GH   D LL  +ARRL+ +L     +AR   +EF V L D 
Sbjct: 439 HGAVLFVDLDRFKTINDSFGHAPADALLKEVARRLQETLRAEDVVARLGGDEFIVALFDI 498

Query: 557 TDLESGQQVASQLLATLDKPMFVDNQLISVTGSVGLACAPLHGRDPQTLMRNAGLALHKA 616
           T  E    V  ++L  L +P  + +  + +T S+G+A  P  GRD +TL+RNA  A+++ 
Sbjct: 499 TKREHAALVGQKILDALAEPFQIVHHEVLLTASIGIAVFPDDGRDAETLLRNADTAMYRV 558

Query: 617 KANGKHQVQVFTEALNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGMEALL 676
           K      +  +++ +N  +  +L +E  LR+A+ + E  ++YQP++ L +GR++G EAL+
Sbjct: 559 KQTSGGPL-FYSQEMNLRSLERLKLEGALRKAVERQEFRLYYQPQVELATGRIVGAEALI 617

Query: 677 RWNHPEKGMIRPDQFISVAEETGLIIPIGKWIARQACRMSKQLSASGMGNLQVAINLSPK 736
           RW+HPE+GMI P  FI +AEETGLI+ IG W+   ACR  +    +G  +L +A+NLSP+
Sbjct: 618 RWHHPEQGMIPPTAFIPLAEETGLIVSIGAWVLDAACRQGRLWREAGYEDLTIAVNLSPR 677

Query: 737 QFSDPDLVASIASILKEEQLPANLLELELTEGLLLEATEDTRLQLDQLKSLGLTLAMDDF 796
           QF  P L   +   L+    P   LELE+TEG+L+  +E     L+     G+ LA+DDF
Sbjct: 678 QFR-PGLSQLVNETLERHAFPGENLELEITEGMLMHNSEAVIQMLEDFHQAGVRLALDDF 736

Query: 797 GTGYSSLSYLKKFPIDIIKIDRSFIHEIPDNQDDMEITSAVIAMAHNLKLKVVAEGIETA 856
           GTGYSSL+YLKKFPID +KIDRSF+  IP + DD  I  A+I+MA NL+L V+AEG+ET 
Sbjct: 737 GTGYSSLAYLKKFPIDNLKIDRSFVSGIPHDGDDSAIAKAIISMAKNLRLLVIAEGVETE 796

Query: 857 EQLAFLRRHRCDVGQGYLFDRPIPGAELLAMLKR 890
           EQL FLR   CD  QGYLF  P+P  +   +L+R
Sbjct: 797 EQLDFLRAAGCDEIQGYLFSPPVPVEDFQLLLER 830



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 9/117 (7%)

Query: 355 NAFLLVNCDGVVEYVNPSFTAITQYSAEEVHGHRLAQLPA------LENLSELLFDAPSS 408
           ++ + ++  G +   N     +  Y+A E  G  +  L A      LE   +L ++A   
Sbjct: 169 DSVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILFLYADDGSETLEEEDDLFYNA--- 225

Query: 409 LAKSNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDITQTKLAQQRI 465
                  + E + R+K+ E +W  +S+S    +  E    IG   DIT     ++++
Sbjct: 226 FLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPAGLIGYLVDITNQLEREEKL 282