Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., LyrR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 47/291 (16%)

Query: 4   YKLLSALAAVVEQAGFERAAQVLGLSQSAISQRIKLLEARVGQPVLVRATPPMP-TDIGR 62
           Y++L   A+VVEQ     AA+VLG+S+S +SQ +K LE R+G  +L R T  +  T+ GR
Sbjct: 7   YRML-VFASVVEQGSLTMAAEVLGISRSMVSQHLKKLEERLGCELLHRTTRRISLTEDGR 65

Query: 63  RLLNHVQQVRLLERDLQSQVPALDEEGMPERLRIALNADSLATWWAEAVSGFCAE-QHLL 121
              ++  ++  L R  ++     DE  +   LR+              +  F     ++ 
Sbjct: 66  EFFHYCGELLQLARQAEAVTRPADEH-LHGSLRVTAPVGLGEHNLLPLIGDFHRRYPNIR 124

Query: 122 LDLVVEDQTVGLKRMRAGEVAACICASERPVAGARSLLLGAMRYRALASPAFVARHFPQG 181
           L L++ED  + L      ++   I A     +  R++ LG+   + +ASP +VA H    
Sbjct: 125 LTLMLEDSKLNLLE---HQIDVAIQAGWPEDSEFRAIKLGSFDEQLVASPEYVAAH---- 177

Query: 182 VRADQLARTPALVFGPDDFLQHRYLA----------SLGVDGGFEHHL-------CPSSE 224
                          PD+   H++LA          +L    G E  +       C S+ 
Sbjct: 178 ----------GKPLHPDNLQHHQWLAHASGHLPKTWTLHNGQGEEFRVRITPFISCNSTN 227

Query: 225 GFIRLTEAGLGWGLVPELQVRDQLEKGILVELLPDKPIDVPLYWHHWRSGG 275
           G I +   GLG  ++P+  V + L  G L  LLPD         +H R GG
Sbjct: 228 GLIAMALQGLGVAILPDNLVNEHLASGALELLLPD---------YHLREGG 269