Pairwise Alignments

Query, 428 a.a., glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 409 a.a., substrate-binding protein of a sugar uptake ABC transporter system from Sinorhizobium meliloti 1021

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 89/367 (24%), Positives = 147/367 (40%), Gaps = 30/367 (8%)

Query: 68  GGATAMTVLKSRAVAGNPPGVAQIKGPDIQEWASTGLLDTDVLKDVAKEEKWDSLLDKKV 127
           G A       + AVAG P G+A +    ++E+A   L+    + +  K+  + +++D   
Sbjct: 67  GWAQCQDKATTLAVAGTPVGMAYVGSRALKEFAENELIVPVPMTEDEKKGYYPNIVD--- 123

Query: 128 SDTVKYEGDYVAVPVNIHRVNWLWINPEVFKKAGITKN--PTTLQEFYAAGDKLKAAGFI 185
             TV +EG    VP+        W N ++FK+AG+     P T  E  A   ++K    I
Sbjct: 124 --TVTFEGTQWGVPIAFSTKALYW-NKDLFKQAGLDPEVPPKTWAEEIAFAKQIKEKTGI 180

Query: 186 PLAHGGQPWQ--DSTVFEAVVLSVMGADGYKKALVDLDNGALTGPEMVKALTELKKVATY 243
             A  G P +  D+T+ + +   V   +G    ++D DN  +  PE++ AL   K +  +
Sbjct: 181 --AGYGLPAKTFDNTMHQFMHW-VYTNNG---KVIDGDNIVIDSPEVLAALQAYKDITPF 234

Query: 244 MDVDGKGQDWNLEAGKVINGKAGMQIMGDWAKSEWTAAKKVAGKDYECVAFPGTDKAFTY 303
                   + N      ++GK GM   G  A +     K   G     +           
Sbjct: 235 SVEGATAYEQNEIRAIFLDGKVGMIQSGSGAAARLKETKVNWGVAPLPLGPSAKGDGTLL 294

Query: 304 NIDSLAVFKQKDKGTAAGQQDIAKVVLGENFQKVFSINKGS--IPVRNDMLNKMDSYGFD 361
             DSL VF  KD G      + AK +     Q  + +  G+   P+R     K+D +   
Sbjct: 295 ITDSLVVF--KDTGVEEKAIEFAKFITSPGPQGEYELQGGAGLTPLRPS--PKVDEF--- 347

Query: 362 SCAQTAAKDFLADAKTGGLQPSMAHNMATTLAVQGAFFDVVTNYINDPKADPADTAKKLG 421
             A  + K F+     GG +P            Q    ++V + +   KA+PAD  KK  
Sbjct: 348 VKADPSWKPFIDGIAYGGPEPL----FKDFKGFQNTMIEMVQSVVTG-KAEPADALKKAA 402

Query: 422 AAIKSAK 428
           A ++  K
Sbjct: 403 ADLEQYK 409