Pairwise Alignments

Query, 302 a.a., glucose/xylose ABC transporter, permease component 2 (from data) from Pseudomonas simiae WCS417

Subject, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  117 bits (293), Expect = 3e-31
 Identities = 65/249 (26%), Positives = 128/249 (51%), Gaps = 6/249 (2%)

Query: 43  TFVLSFTNSTFLPTYKWAGLAQYARLFDNDRWWVASKNLAVFGGMFIGITLVIGVTLAIF 102
           + VLS         Y + G   Y R++++  +W  ++  A++  M + +  V G+ LA+ 
Sbjct: 51  SLVLSVFEVNGFGGYSFVGARNYLRMWNDPLFWKGARVTALYAAMLVPLLYVCGLGLALL 110

Query: 103 LDQKIRREGFIRTIYLYPMALSMIVTGTAWKWLLNPGMGL-DKLLRDWGWEGFRLDWLID 161
           + +  R    +R+++  P  +S++V    W++++   +G+  +L       G  L  L D
Sbjct: 111 VQRTDRFNAIMRSMFFAPHMVSLVVVALVWQFMVVDKIGVVSRLTAALDIGGISL--LGD 168

Query: 162 PDRVVYCLVIAAVWQASGFIMAMFLAGLRGVDQSIVRAAQIDGASMPRIYWSVVLPSLRP 221
           P+  +  +V+ +VW   GF M +FL GL+ + +    AA IDGA     +W + LP L+P
Sbjct: 169 PNFALITIVLVSVWFLMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIARFWFITLPLLKP 228

Query: 222 VFFSAVMILAHIAI---KSFDLVAAMTAGGPGYSSDLPAMFMYSFTFSRGQMGMGSASAI 278
             F  +M+    A+   ++FD++  MT GGP  ++ +  +++Y   F  G  G  +A A 
Sbjct: 229 TSFFVIMVSMVAAVAGAQAFDIIYVMTKGGPANATSVLIVYIYQQAFGFGAFGYAAAMAS 288

Query: 279 LMLGAILAI 287
           +++ A++ +
Sbjct: 289 ILVVALMIV 297