Pairwise Alignments

Query, 281 a.a., glucose/xylose ABC transporter, permease component 1 (from data) from Pseudomonas simiae WCS417

Subject, 282 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  125 bits (314), Expect = 1e-33
 Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 10/273 (3%)

Query: 13  SRIAIYAVLILAVLLYLVPLVVMLLTSFKTPED--ISSGNLLS---WPTVVTGIGWVKAW 67
           +R+ +Y  L L  +L L+PLV   L  FK+  D  ++   L S   W   +  +   + W
Sbjct: 14  TRLYLYVSLSLVAMLVLLPLVTTALGGFKSLGDLRVNPFGLPSEWLWSNYLDILFGDRYW 73

Query: 68  ATVDGYFWNSIKITVPAVLISTAIGALNGYVLSFWRFKGSQLFFGLLLFGCFLPFQTVLL 127
             +     NS+ I    V+++  + A+  +  +  RF GS       L G   P  T +L
Sbjct: 74  RQM----LNSLFIAAITVVLTVIVSAMAAFTFAHVRFFGSNHLLNYFLIGLMFPAATAIL 129

Query: 128 PASFTLGKMGLASTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALIKAARLDGAGFFTIF 187
           P    +  +GL  T  G++   V +GL  + L FRNY+ ++P+ L +AA +DG G+   F
Sbjct: 130 PLFIRIRDLGLLDTYWGVILPQVAFGLGMSILLFRNYFRNLPEELFQAAFVDGCGYIRFF 189

Query: 188 RQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTSTGAKEYNV 247
             I LP+S PI+    I  F   WN ++  ++  + +++     L  +V       ++ +
Sbjct: 190 WYISLPLSRPIVSTVGIITFVHSWNSYILPLIMLNTEAK-YPWPLGIMVYRGEFGTDWQL 248

Query: 248 DMAAAMIAGLPTLLVYVIAGKYFVRGLTAGAVK 280
            +A   +  LPT++V+ +A K+ + GLTAGAVK
Sbjct: 249 VLAFITLTILPTVIVFFLAQKHIIAGLTAGAVK 281