Pairwise Alignments

Query, 281 a.a., glucose/xylose ABC transporter, permease component 1 (from data) from Pseudomonas simiae WCS417

Subject, 287 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  134 bits (336), Expect = 3e-36
 Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 11/275 (4%)

Query: 14  RIAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISSGNLLSWPTVVTGIGWVKAWATVDGY 73
           RI  + + I     +L P  V  L SF+   +     L  WP  ++G+ +  A+  +D +
Sbjct: 16  RIVYHGIGIGTAFFFLAPFAVSFLASFRPNSESGRPPLPPWP--ISGLSF-DAYRALDSF 72

Query: 74  -------FWNSIKITVPAVLISTAIGALNGYVLSFWRFKGSQLFFGLLLFGCFLPFQTVL 126
                   +NS+ +++  V+++ A+  L GY  S +RF      F L++    +PFQ++L
Sbjct: 73  GAGIWQHMFNSLIVSIGTVVLTVAVSVLAGYGFSRYRFPFKNALFVLIIATLMIPFQSIL 132

Query: 127 LPASFTLGKMGLASTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALIKAARLDGAGFFTI 186
            P    L + GL ++  GL+ V+V   L F+    RN + ++P  + +AAR+DGA    +
Sbjct: 133 TPLFIILARFGLNNSLVGLMLVYVTLQLPFSVFMMRNAFDAVPKEIEEAARIDGARDLKL 192

Query: 187 FRQIILPMSTPIIMVCLIWQFTQIWNDFLFG-VVFSSGDSQPITVALNNLVNTSTGAKEY 245
             +++LP+  P I    I+ F   WN+F    V+ SS D+  + V +  +     GA  +
Sbjct: 193 LVRVLLPLVMPGIATVSIFAFLNAWNEFFAALVLLSSNDNYTLPVLMTAVRAGRLGAINW 252

Query: 246 NVDMAAAMIAGLPTLLVYVIAGKYFVRGLTAGAVK 280
               A   +  +P L V+++  +Y++RGL AGAVK
Sbjct: 253 GAVQAGVAVMVVPCLFVFLLLQRYYMRGLMAGAVK 287