Pairwise Alignments

Query, 562 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  333 bits (853), Expect = 1e-95
 Identities = 201/534 (37%), Positives = 299/534 (55%), Gaps = 29/534 (5%)

Query: 37  FADRPAFSNMGITLTYAELERQ-SAAFAGYLQQHTDLKPGDRIAVQMPNVLHYPIAVFGA 95
           F D PA   +G   TY EL  Q   A AG+  Q   ++PG R+ + +PN  +Y I  +G 
Sbjct: 36  FPDNPAIDFLGRKWTYRELGEQIDRACAGF--QSLGVEPGTRVGLCLPNTPYYIICYYGV 93

Query: 96  LRAGLIVVNTNPLYTPREMRHQFKDAGVRALVYLNL--FGSRVQEVCSDTEIDYLIEARM 153
           L+AG IVVN NPLY  RE+R   +D+G   +V L+L     +V  +  DT ++ ++   M
Sbjct: 94  LKAGGIVVNFNPLYVERELRELVEDSGTTLMVTLDLRQIYPKVAALLGDTALERIVVCSM 153

Query: 154 GDFMPTAKGWLVNTLVDKVKKMVPAYSLPRAVAFKRALHMGAGLGVTRHPVTLDD---IA 210
              +P+ K  L + L  K  ++    +  R + F + +           PV +D    +A
Sbjct: 154 SAILPSVKSLLFSVL--KRSELADVPTDRRHIGFAKLI----ATKTPPRPVAIDPATAVA 207

Query: 211 VLQYTGGTTGLAKGAMLTHGNLVANMQQVRACMSQTGDDGHPLIKEGQEVMIAPLPLYHI 270
           VLQYTGGTTGL KGAMLTH N+  N+ Q+            P  + G+E M+A LP +H+
Sbjct: 208 VLQYTGGTTGLPKGAMLTHANVTGNLTQILGWF--------PEARWGEEKMLAVLPFFHV 259

Query: 271 YAFTANCMCMMVSGNHNVLITNPR-DIGGFIKELKKWRFTGLLGLNTLFVALMDHPDFKS 329
           +A T      +  G   +L+  PR D+   +K + + + T   G+ T++ A++       
Sbjct: 260 FAMTVAMNVALALGAELILL--PRFDLETVLKTIARKKPTLFPGVPTIYSAIIGAVAKTP 317

Query: 330 LDFSHLKLTNSGGTALIKATAERWQQITGCAIGEGYGLTETSPVASTNPYGNKSRLGTVG 389
            D S L+   SGG  L      R++++TGC + EGYGL+E SPV   NP     + G++G
Sbjct: 318 YDLSSLRFCLSGGAPLPIEVKTRFEELTGCTLIEGYGLSEASPVVCCNPLDGAIKPGSIG 377

Query: 390 IPVPATAMKV--IDDHGVELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWLKTGD 447
            P+P T +++  + D  + +P GERGE+C++GPQVM GYW++P+ T +    +G L+TGD
Sbjct: 378 QPLPGTTVEIRSVLDPALIVPRGERGEICVRGPQVMAGYWRRPQDTEDTF-IDGALRTGD 436

Query: 448 IAVIDEEGFVSIVDRKKDLIIVSGFNVYPNEIEDVVMAHPAVANCAVIGVPDERTGEAVK 507
           I  ID+EG+V +VDR KD+I+  G+NVYP  IE+ +  H AVA   VIG+PD+  GEA K
Sbjct: 437 IGYIDDEGYVFLVDRIKDVILCGGYNVYPRIIEEALYQHEAVAEAVVIGLPDDYRGEAPK 496

Query: 508 LFVVAR-AEGVSLEELKAYCKTNFTGYKVPKHIVLRDSLPMTPVGKILRRELRD 560
            FV  R     + E+LK Y  T  +  ++PK I LRD LP T VGK+ ++ L D
Sbjct: 497 AFVRLRDGHSATPEDLKTYLATQISRIEMPKTIELRDDLPRTMVGKLSKKALVD 550