Pairwise Alignments

Query, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas simiae WCS417

Subject, 562 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2C3

 Score =  684 bits (1766), Expect = 0.0
 Identities = 335/561 (59%), Positives = 422/561 (75%), Gaps = 9/561 (1%)

Query: 1   MNEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG 60
           M  DFW DK PAG+  +++   Y ++  V ++SC++FA++PAFSN+G T+TY EL   S 
Sbjct: 1   MQPDFWNDKRPAGVPLDVDLGTYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA 60

Query: 61  AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120
           AFA YLQ HTDL PGDRIAVQ+PN+LQYP+AVFGA+RAGLIVVNTNPLYTAREM HQF D
Sbjct: 61  AFAGYLQTHTDLAPGDRIAVQMPNILQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD 120

Query: 121 SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH 180
           SGA+ALV L       ++V+P T ++++I  ++ DL+P  K  L+N+++  VKKMVPAY 
Sbjct: 121 SGARALVYLNMFGQKVQEVLPDTDLQYLIEAKMGDLMPTAKGWLVNTMVSKVKKMVPAYS 180

Query: 181 LPNAIKFNDVLAKGHGQPVSDASPTSSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK 240
           LP AI F   L  G GQ +   + +  D+AVLQYTGGTTG+AKGAMLTH NLVANM Q +
Sbjct: 181 LPQAISFKSALRLGRGQGIKPLNVSLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR 240

Query: 241 ALMGS-------NLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMV 293
           A +G         L EG E++I PLPLYHIYAFT +CM MM+ GNHN+LI+NPRD+   +
Sbjct: 241 ACLGQLGEDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI 300

Query: 294 KELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCG 353
           KEL  W+FS  +GLNTLFVAL ++  F+ LDFS LKVT SGG AL  A AERW+ +TGCG
Sbjct: 301 KELKNWRFSLLLGLNTLFVALMDHPDFKTLDFSHLKVTNSGGTALIKATAERWQQLTGCG 360

Query: 354 ICEGYGMTETSPVATVNPI-QHIQIGTIGIPVPSTVCKVIADDGTELALGETGELCVKGP 412
           I EGYG+TETSPVA+ NP     ++GT+G+PVP T+ KVI DDG E  LGE GELC+KGP
Sbjct: 361 ITEGYGLTETSPVASANPYGGKSRLGTVGMPVPGTLMKVINDDGLEQPLGERGELCIKGP 420

Query: 413 QVMKGYWQRQDATDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELE 472
           Q+MKGYW + +AT E+LDSEGW K+GDIA+I PDG++RIVDRKKDMI+VSGFNVYPNE+E
Sbjct: 421 QIMKGYWNKPEATAEVLDSEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE 480

Query: 473 DVLAGLPGVLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHMRANVTAYKVPKAV 532
           DV+   P V  CA IGVPDE+SGE +KLF+V +  A ++ E++  + + N T YK+PK +
Sbjct: 481 DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARE-AGVSLEELKAYCKENFTGYKIPKHI 539

Query: 533 EFRDALPTTNVGKILRRELRD 553
             RD+LP T VGKILRRELRD
Sbjct: 540 VLRDSLPMTPVGKILRRELRD 560