Pairwise Alignments

Query, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas simiae WCS417

Subject, 562 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

 Score =  671 bits (1731), Expect = 0.0
 Identities = 336/562 (59%), Positives = 414/562 (73%), Gaps = 11/562 (1%)

Query: 1   MNEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG 60
           M  DFW DK PAG+ AE++   Y ++  V ++ C++FA++PAFSN+G T+TY EL   S 
Sbjct: 1   MQADFWDDKRPAGVDAEVDLQTYQSVVDVFERCCRKFADRPAFSNMGVTLTYAELERHSA 60

Query: 61  AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120
           AFAAYLQQHT L PGDRIAVQ+PN+LQYP+AVFGA+RAGL VVNTNPLYTAREM HQF D
Sbjct: 61  AFAAYLQQHTQLVPGDRIAVQMPNILQYPIAVFGAMRAGLTVVNTNPLYTAREMRHQFKD 120

Query: 121 SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH 180
           SGA+ALV L     L ++V+P TA++++I  ++ D+    K  L+N+++  VKKMVP +H
Sbjct: 121 SGARALVYLNLFGKLVQEVLPDTAIEYLIEVKMGDMQSAAKGWLVNTIVDKVKKMVPEFH 180

Query: 181 LPNAIKFNDVLAKGHGQPVSDASPTSSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK 240
           LP A+ F   L  G    +        DVAVLQYTGGTTG+AKGAMLTH NLVANM Q  
Sbjct: 181 LPQAVGFKRALRLGRDSRMQVVPRGLQDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQVY 240

Query: 241 ALM-------GSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMV 293
           A M       GS   EG E++I PLPLYHIYAFT +CM MM+ GNHNILI+NPRD+   +
Sbjct: 241 ACMRQQGPRGGSLFEEGKEVMIAPLPLYHIYAFTANCMCMMISGNHNILITNPRDIGGFI 300

Query: 294 KELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCG 353
           KEL KW+F+  +GLNTLFVAL N+  F+KLDFSALK T SGG AL  A AERW  +TGC 
Sbjct: 301 KELGKWQFTAMIGLNTLFVALMNHPEFKKLDFSALKSTNSGGTALVKATAERWAQITGCT 360

Query: 354 ICEGYGMTETSPVATVNPIQHI-QIGTIGIPVPSTVCKVIADDGTELALGETGELCVKGP 412
           I EGYG+TETSPVA+ NP   + ++GT+GIPVP T  KVI D+G EL  GE GELC+KGP
Sbjct: 361 IVEGYGLTETSPVASANPYGTMARLGTVGIPVPGTAMKVIDDNGVELPFGERGELCIKGP 420

Query: 413 QVMKGYWQRQDATDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELE 472
           QVMKGYW + DAT E LD+EGW KTGDIA+I  DG++ IVDRKKD+I+VSGFNVYPNE+E
Sbjct: 421 QVMKGYWNQPDATAECLDAEGWFKTGDIAVIGADGFVSIVDRKKDLIIVSGFNVYPNEIE 480

Query: 473 DVLAGLPGVLQCAAIGVPDEKSGEHIKLFIVVK-PGATLTKEQVMEHMRANVTAYKVPKA 531
           DV+   P V  CA IGVPDE+SGE +KLF+V + PG  L+ E++    + N T YKVP+ 
Sbjct: 481 DVVMAHPKVANCACIGVPDERSGEAVKLFVVARDPG--LSIEELKAFCKENFTGYKVPRQ 538

Query: 532 VEFRDALPTTNVGKILRRELRD 553
           +  RD+LP T VGK+LRRELRD
Sbjct: 539 IVLRDSLPMTPVGKVLRRELRD 560