Pairwise Alignments

Query, 289 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 11/290 (3%)

Query: 2   MNLMHWRLLVAVADHGSITAAAERVGMTQSAASQAMAGMEATLGAQLFTREPRKT----L 57
           M++   + L A+A+ GS TAAA+++ M Q A SQ++  +E +LG  L  R   K      
Sbjct: 1   MDIRQLKHLDALANTGSFTAAAKKLNMAQPALSQSIKRLEQSLGVTLINRTSNKNDKHLA 60

Query: 58  PTALGLSVIAQARVMLAALQTIRSTVDEARPMLRGTIRIASFPMVLATFLTPLLLRFAQL 117
            TA GL +   A ++L  ++   + +     +  G +RIA   M+ + +L   L+ F   
Sbjct: 61  LTAEGLVLHQHATLILKQIKQAEAQIRAMANLTSGEVRIAVPGMLGSFYLPSRLMAFRHQ 120

Query: 118 YPGIEVTTLDVTDNEVLTLLDADLIDLGVVL--NPKPERNATVLGRDFWMAVLATDHALA 175
           YP ++++  +    + L +L  + +D+ ++   + + + ++ +L R+  +  +  +H LA
Sbjct: 121 YPELKLSLFEGGTRDALRMLQQEEVDIAIITAQDLQSDFDSQLLIREQMVIAMGAEHPLA 180

Query: 176 QRPADATVALEELLEQPFVLATGGCTANARSLGAAAGLTLR-DIRVEVREWNSAFSLVRE 234
             PA   V+L +  +   V+   G       L  A  L  + +I  E    N    +V +
Sbjct: 181 DHPA---VSLNDFFDHELVMFKTGYFHREWILSQAKELGKKPNIAFETNLINLIKQIVSQ 237

Query: 235 GVGVTLVPEMALPAQRKGLRVMPLTVPLHREFALVGSPTRPPSAAASALL 284
           G G+T V EMA+ + +  +   P   P+     +     RP S A  A +
Sbjct: 238 GFGITSVLEMAI-SPKDDILAKPFDPPVFLNLHIAWKKQRPVSQADRAFV 286