Pairwise Alignments

Query, 439 a.a., pili assembly chaperone from Pseudomonas simiae WCS417

Subject, 453 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  347 bits (889), Expect = e-100
 Identities = 198/443 (44%), Positives = 277/443 (62%), Gaps = 14/443 (3%)

Query: 1   MFNRHHKSDLQQIERFSCALTESNAKLAAISRSMAMIEFDVSGVILDANDNFCNTMGYSA 60
           MFN   K +L  + +   +L +    L    R M  +  D  G I   N NF + M Y +
Sbjct: 16  MFNNRLKQELLALRQELSSLVQVKESL---DREMLGLTLDADGRIQSVNQNFLDEMRYKS 72

Query: 61  EEIRGKHHRLFCDE---AYTHTDAYAKLWRD-LARGEALSGTFMRLNKHGQEVWLEASYM 116
           +++ G+      DE    Y  T+ +   ++  L RGE  SG    L  +GQE WL +   
Sbjct: 73  QDLIGRA----VDELVPGYLKTNEFQVRFKSALTRGEHFSGAVRLLRGNGQEAWLRSILQ 128

Query: 117 PVLDKDNQVQSVIKVASDITARVHHEHENQSLIDAIGRSMAVIEFTPQGQILNANENFLK 176
           PV   D +V+     ++D+T  +    E+++LI A+ RS AVIEF   G +L AN+ FL 
Sbjct: 129 PVQGADGRVRFFSMYSNDLTRTIEASREHENLIGALVRSTAVIEFDLGGHVLTANDRFLN 188

Query: 177 TVQYSLDEIVGQHHSMFCHRSEVESPAYKAFWASLNRGEYHSHRFERKNKYGKTLFLEAS 236
            + YSL +I G+HH MFC   E  S AY+ FW  LN GE+ + RF+R +  G+ ++LEAS
Sbjct: 189 AMGYSLAQIKGKHHRMFCEPEEYNSAAYEQFWKRLNSGEFVAGRFKRIDSSGREVWLEAS 248

Query: 237 YNPIFDTNGRLYKVVKFASDITDQVT---TLRNAADSAHATSVQNDACARKGSEVVQQTV 293
           YNP+ D N RLYKVVKFA++ITDQV     +  AA+ A++TS+Q D  A++G+ VV Q V
Sbjct: 249 YNPVLDANERLYKVVKFATNITDQVNQEKAVAEAANIAYSTSLQTDNSAQRGTTVVTQAV 308

Query: 294 QIIEEISHDLNQAAVSIDAVSKQSDIIGAIVQTIRSIAEQTNMLALNAAIEAARAGEHGR 353
            ++ +++  +  A   I+A+++QS +IG IV+TI  IAEQTN+LALNAAIEAARAGE GR
Sbjct: 309 DVMRDLARHMQTAGEGIEALNEQSLVIGTIVKTISGIAEQTNLLALNAAIEAARAGEQGR 368

Query: 354 GFAVVADEVRSLAARTSQATVEIVDVVRKNHDLSLSAVSSMQSSLSRTGVGVELANEAGQ 413
           GFAVVADEVR LA+RTSQAT EIV VVR+N D++ +AV+ M     +   G+ LA EAG 
Sbjct: 369 GFAVVADEVRQLASRTSQATDEIVGVVRQNQDMARNAVALMTDGQHQAEHGLALAAEAGT 428

Query: 414 VILEIQEGSRHVVDAIGQFNSTL 436
           VI+EIQ+G++ VVDA+ QF + L
Sbjct: 429 VIVEIQDGAKKVVDAVSQFANQL 451