Pairwise Alignments

Query, 439 a.a., pili assembly chaperone from Pseudomonas simiae WCS417

Subject, 421 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  354 bits (908), Expect = e-102
 Identities = 186/406 (45%), Positives = 263/406 (64%), Gaps = 3/406 (0%)

Query: 34  MAMIEFDVSGVILDANDNFCNTMGYSAEEIRGKHHRLFCDEAYTHTDAYAKLWRDLARGE 93
           MA+IEF   G +L AN+NF  TMGY A+++ G  HR FC  A   +  Y + W  L  G+
Sbjct: 1   MAVIEFSPDGKVLRANENFLGTMGYRADQLAGLSHRDFCTPALVGSAEYREFWNQLRAGQ 60

Query: 94  ALSGTFMRLNKHGQEVWLEASYMPVLDKDNQVQSVIKVASDITARVHHEHENQSLIDAIG 153
            +SGTF R +  GQ VWLEASY P++D+  +V  V+K A D+TA+V  E E +  + A+ 
Sbjct: 61  FVSGTFQRRSAQGQNVWLEASYNPIVDEQGRVVKVVKYALDVTAKVASEAETRGRLAALD 120

Query: 154 RSMAVIEFTPQGQILNANENFLKTVQYSLDEIVGQHHSMFCHRSEVESPAYKAFWASLNR 213
           R+MAVIEF   G IL AN+NF+  + Y+L E+ G+HH MFC  S V S  Y  FW  LN 
Sbjct: 121 RAMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSEYSDFWRRLNA 180

Query: 214 GEYHSHRFERKNKYGKTLFLEASYNPIFDTNGRLYKVVKFASDITDQVTTLR---NAADS 270
           GE+ S +F+R  K GK ++LEASYNP++D  G+L K+VKFASDI+++V         A  
Sbjct: 181 GEFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEKFEEDSRGASR 240

Query: 271 AHATSVQNDACARKGSEVVQQTVQIIEEISHDLNQAAVSIDAVSKQSDIIGAIVQTIRSI 330
           A+  S + +  A +G++V+ QT + + EI+ ++  +A  +  +  +S+ I AIV TIR I
Sbjct: 241 AYHISAETERVAEQGAQVIHQTAKEMREIADNIGSSARLVGQLGARSEEITAIVNTIRGI 300

Query: 331 AEQTNMLALNAAIEAARAGEHGRGFAVVADEVRSLAARTSQATVEIVDVVRKNHDLSLSA 390
           A+QTN+LALNAAIEAARAG+ GRGFAVVADEVR LA RTS++T EI +++      +  A
Sbjct: 301 ADQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAGRTSRSTSEIAEMIGMILSETRDA 360

Query: 391 VSSMQSSLSRTGVGVELANEAGQVILEIQEGSRHVVDAIGQFNSTL 436
           V+SM  +      GV LA++AG VI++I+ G+   ++A+  F S L
Sbjct: 361 VASMNVTHEGALRGVTLADQAGSVIVQIRNGTTDALEAVSMFASKL 406



 Score =  130 bits (328), Expect = 6e-35
 Identities = 61/124 (49%), Positives = 84/124 (67%)

Query: 22  ESNAKLAAISRSMAMIEFDVSGVILDANDNFCNTMGYSAEEIRGKHHRLFCDEAYTHTDA 81
           E+  +LAA+ R+MA+IEFD+ G IL ANDNF N M Y+  E++GKHHR+FC+ +   +  
Sbjct: 111 ETRGRLAALDRAMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSE 170

Query: 82  YAKLWRDLARGEALSGTFMRLNKHGQEVWLEASYMPVLDKDNQVQSVIKVASDITARVHH 141
           Y+  WR L  GE  SG F RL K+G+ VWLEASY PV D + ++  ++K ASDI+ RV  
Sbjct: 171 YSDFWRRLNAGEFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEK 230

Query: 142 EHEN 145
             E+
Sbjct: 231 FEED 234