Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (371), Expect = 4e-40
 Identities = 103/332 (31%), Positives = 166/332 (50%), Gaps = 12/332 (3%)

Query: 17  TLNEVARLAGVSPITASRALRGISTVATELVEKVQQAAAELKYVVNPAARALASAQSHSV 76
           T+ +VA+LAGVS  T SRAL     V++   ++V++A  E  Y  N  AR L   +S ++
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 77  VVLVPSLSNLLFIETLEAIHQVLRPKGFEVLIGNSHYSRDEEENLLRNYMAYQPRGLLLT 136
           V +VP + +  F E +  I       G+ VL+G+S   +  E + +      Q  G+LL 
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 137 GFDRTESARRMVEASNVPCVYMMDLDPNAGVNCVGFSQLAAGETAAAHLLSRGRKRLAYI 196
           G D      +  + +  P V   +  P   +  V    L +   A  +L   G KR+A I
Sbjct: 123 GTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQI 182

Query: 197 -GAQLDQRTLLRGEGFRRALQQAGLYDPALELLTPRPSSVG-----LGGELFLQLLAAHP 250
            G Q       R +G+++AL++AG+       + P   + G      G +   QLLA   
Sbjct: 183 SGPQHAALCQFRHQGYQQALRRAGI------TMNPTYCTFGDFTFEAGAKAVRQLLALPE 236

Query: 251 DVDAIFFGNDDLAQGALLEALRHGIKVPERVAVLGFNDLPASSFMVPRLSSISTPREAIG 310
              AIF  ND +A GA+ EA R G++VP+ ++V+GF+D+  + +  P L++IS PR  IG
Sbjct: 237 QPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIG 296

Query: 311 RRAAEQLLTIMAGNKIAKPVVDMGFELQVRES 342
           R+A   +L ++ G+ +      +  +L VRES
Sbjct: 297 RQAMLMMLELLRGHDVRAGSRLLETKLVVRES 328