Pairwise Alignments

Query, 658 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 442 a.a., VgrG protein from Pseudomonas fluorescens FW300-N2E2

 Score =  412 bits (1058), Expect = e-119
 Identities = 212/457 (46%), Positives = 293/457 (64%), Gaps = 22/457 (4%)

Query: 1   MFAPANQSAFTLTLDGEPSEFKVFEFSGIESISQPYRFDIELVSEQPDLDLESLLHRQVY 60
           MF+PANQ+ F+LT++G   +F+V  F+G E+IS+PY F++E VSE+ DLDL+SL   + +
Sbjct: 1   MFSPANQTHFSLTIEGFEHDFQVLAFTGKEAISRPYLFNVEFVSERSDLDLKSLFDVEAF 60

Query: 61  LGFDDRGRGVHGLVYRMAQGDSGRRLTRYQMTLVPQLAYLGHSSHQRIFQHKTVPQIVAQ 120
           L FD +G G+HG VY +A   +G  LTRY++ LVP LAYL H  +QRI+Q  +VP+IVA 
Sbjct: 61  LTFDSKGNGIHGRVYHIAHSSNGECLTRYRLALVPHLAYLRHRINQRIYQQFSVPKIVAL 120

Query: 121 VLEGQGIQRDRFEFRLSGTYPEREYCVQFGETDLAFIQRLCAELGIHYHFQHSSAGHLLV 180
           +LE  GI  D + F L  TYPER+YC Q+ ETDL FIQRLC E GIH+HFQHS+ GH+LV
Sbjct: 121 ILEEHGILGDAYRFHLGATYPERDYCTQYDETDLHFIQRLCEEEGIHFHFQHSTQGHVLV 180

Query: 181 FGDDQTVFVQADPPTPYTPGSGMVADTPVIKRFAVQVQARTTGVNLRDYDFRKPSLALES 240
           FGDDQ+VF     PT Y   S  VAD P+IKR  +++   T+ ++ R+YDF +  L +E 
Sbjct: 181 FGDDQSVFPSIGQPTAYRHESDRVADEPLIKRINLRLGQLTSRISHRNYDFEQ-QLDIEK 239

Query: 241 EVTGEQLPPLEAQVYPGHFNDRAHGKYLAQRGLERHRSDYRVARGSGDEPALGSGRFLKL 300
           + +        +Q Y GH     HGK +  R +ER  + YR A G  D+  L SG  L++
Sbjct: 240 DDS--------SQRYTGH----EHGKQIRLRTMERRHAAYRQAEGQSDQTRLVSGHVLEI 287

Query: 301 AGHPREDWNDLWLVTHVTHEGLQPQVLEESVTE---VAGGDFRQGYRNEFSATPWDAIFR 357
           +GHPR++WN LWL+T V HEG QPQVL E+V     +   DF QGYRN F   PW+  +R
Sbjct: 288 SGHPRQEWNTLWLLTQVIHEGRQPQVLGENVARGNTLNEDDFHQGYRNRFVVLPWNVSYR 347

Query: 358 PPMPEQPRPTIAGYQNAVVTGPADSEIHCDE-YGRVKVQLVWDRDGEHNDHSSCWLRVAS 416
           PP+  + +P +   Q AVV       I  D  +G++KV+  WDR+   +D S CWL+ A+
Sbjct: 348 PPLAHK-KPQVPSMQTAVVVASEGEGIQNDRCFGQIKVKFPWDREDRFDDKSHCWLKGAT 406

Query: 417 GWAHDRYGSVLIPRVGMEVLVGFVNGDMDMPLVMGCL 453
            W+ +    +  PR+GM+V+V F+  D D P+V GCL
Sbjct: 407 DWSCE----IGPPRMGMKVVVTFLENDPDQPVVGGCL 439