Pairwise Alignments

Query, 252 a.a., LamB/YcsF family protein from Pseudomonas simiae WCS417

Subject, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (402), Expect = 5e-44
 Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 5/245 (2%)

Query: 2   QAVDFNSDMGEGFGPWTIGDGVDAELMAYISSANIATGFHAGDPGTMRRTVERAKQLGVA 61
           + +  N DMGE FG WT+G   D E+M +I  ANIA GFHA DP  M RT++ A +  V 
Sbjct: 4   RTIQLNCDMGESFGVWTMG--ADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVM 61

Query: 62  IGAHPGFRDLVGFGRRHINAPAQELVDDMLYQLGALREIARAQGMTLQHIKPHGALYMHL 121
           IGAHP + DL GFGRR +    QE+ + +LYQ+GAL+ +  ++   L ++KPHGALY  +
Sbjct: 62  IGAHPSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDM 121

Query: 122 ARDEEAARLLIQNLQIIE-PTLLLYCMPNSVIWRVAKELGQPVVREFYADREYDLTGSIV 180
             D    R ++  +     P ++L    N     +A     P++ E +ADR Y   G + 
Sbjct: 122 MSDPSIFRAVVDAVSCFNLPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLT 181

Query: 181 FTRNVRAL--DPATVAARVLRACQTGRVRTVEGEDLLIEFDSICLHSDTPGALELVEATR 238
                 A+      +  +V +  + G+V + +G  + IE D++C+H D P A+ L+   R
Sbjct: 182 PRSQPNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIR 241

Query: 239 EALDQ 243
            ALD+
Sbjct: 242 AALDE 246