Pairwise Alignments

Query, 439 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 432 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  318 bits (815), Expect = 2e-91
 Identities = 182/434 (41%), Positives = 268/434 (61%), Gaps = 12/434 (2%)

Query: 2   LFNAH-KKTIDSLQHTLAQHASLLDAIERSMAVIEFDLHGNVLRANANFLQAMGYRAEQI 60
           +FN+  +K +   +    +  +++D+I+ S+A IEF   G +L AN  FL+A+GY  ++I
Sbjct: 1   MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEI 60

Query: 61  EGQSHRMFCTPAFARSAEYNQLWSNLRNGQYQSGTFERVAGDGQSVWLEASYNPVRDDAG 120
            G+ H++FC   +  ++EY Q W  L+ GQ + G F RV  +GQ +WL A+Y P++ D G
Sbjct: 61  VGKHHKLFCAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLD-G 119

Query: 121 HVIKVVKYAMDVTP-RLQAESEANAKLAAISRAMAVIEFNLDGTIITANANFLQRMGYTL 179
            + K++K A  +T  + Q +++A A  +A+ ++ A+IEF+ +G I+ ANANFL+ MGY+ 
Sbjct: 120 KITKIMKTAAVITEDKYQLDAQA-ALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSK 178

Query: 180 AQVQGQHHRLFCTKALANSPAYED---FWRRLNQGEMFSGQFERVDKNGQAVWLEANYNP 236
            Q+QG+HHRLFC         Y+D   FW  L +G+   G F+R +  G ++WLEA YNP
Sbjct: 179 EQLQGKHHRLFCFDNF-----YQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNP 233

Query: 237 VYDAGGRLCKVVKFASDVTAMVQQHTADAASAAQAYHISLNTRDIAEKGAEVIQQTASGM 296
           V D  G++ KV+KFASD+T  + +  A   +A  A+  S +T + A +G +++  T +  
Sbjct: 234 VMDDHGKVVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTS 293

Query: 297 RDIAADIDGSSQLIAKLGERSQQITAIVNTIRGIADQTNLLALNAAIEAARAGEQGRGFA 356
             IAA    +++ + KL E+SQ I AIV TI  IADQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 294 NAIAAQTHKTTESMLKLNEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGFA 353

Query: 357 VVADEVRQLAARTSGSTAEISSMIAMIQDETRQAIHSMDGTRDRAAQGVDLANRAGTVIL 416
           VVADEVRQLAARTS ST EI++++      T  A   M+     A +G         V+ 
Sbjct: 354 VVADEVRQLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMG 413

Query: 417 QIREGTSDAVQAVS 430
            IR G  +  + VS
Sbjct: 414 DIRTGAENVAETVS 427