Pairwise Alignments

Query, 292 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  134 bits (338), Expect = 1e-36
 Identities = 79/214 (36%), Positives = 130/214 (60%), Gaps = 15/214 (7%)

Query: 79  TIIMSVLAMALGVVIGVITAIMR-MSANPILRYVAITYTWLFRGTPLILQLLLWFNLALI 137
           T+ +++++  L V+I V+    R M+ +  L  V + Y  +FRGTPL++QL   +     
Sbjct: 20  TLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFFIYY---- 75

Query: 138 FPVIAIPGLFSIDTVDLMTPFVAALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGM 197
                  GL SI     M+   AA+LGLS+N GAY +E++RA + SV  GQ+EAA+S+GM
Sbjct: 76  -------GLPSIGIT--MSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGM 126

Query: 198 PSLQALRRVILPQAMRVIIPPVGNEFISMVKMTSLASVIQYSELLHNAQNIYYANARVME 257
             ++++  ++LPQA R+ IPP+ N F S++K +SL SV+  +EL    Q IY   +R  E
Sbjct: 127 GKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTSRPFE 186

Query: 258 LLIVAGIWYLAVVTVLSFGQSRLERRFARGAGKR 291
           + +  G+ YL +V+++S G  ++E++   GA +R
Sbjct: 187 IYLTIGLIYLILVSIISIGSWKIEKKL-NGAFER 219