Pairwise Alignments

Query, 319 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  215 bits (548), Expect = 9e-61
 Identities = 121/298 (40%), Positives = 179/298 (60%), Gaps = 7/298 (2%)

Query: 21  LQLSGLDFKLLRVFMAVVEAGGFSAAQNELNVGLAAISKQISDLEIRIGMRLCTRGREGF 80
           +Q+  +D KLLR+F+A+VE GG SAA++ LN+G + IS  +SDLE+R+G++LC RGR GF
Sbjct: 1   MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGF 60

Query: 81  GLTEEGKLVYQASIELFTSVDSFRDKLSSAQNELIGDLSVGVIDNTVSDVNSPLITALGK 140
            LTE G++ YQAS+EL    D+F   ++SA+ EL G +S+ VID  VSD    +   +  
Sbjct: 61  ELTESGRVTYQASLELLQHCDAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAA 120

Query: 141 LHSESPKIRLRLHASQLDEVERGVVEGRLIVGIVPVYQRREEFDYFPLYEEKAHAYCAVG 200
           L ++S  I+  ++  +  EVE  VV GR +VGI          DY PL+ E  + YC VG
Sbjct: 121 LKAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHLRGLDYHPLHNETNYLYCGVG 180

Query: 201 HPLFTA-SDITPEVLRQYEVVNHRYAIHRDKAN-FVNYDSQSASASQVEAVAILILTGRF 258
           HPLF    D  P +L+  EV+   Y   ++  N  +NY + +A+A   E +A LIL+G+F
Sbjct: 181 HPLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQN-TATAYHDEGIAHLILSGKF 239

Query: 259 LGFLPQHYAAPLVREGRLRALCPEHVHLSTAFNLILRHNAPRSPLVKAFATALGVDLK 316
           +G+LP+HYA+  V +G  +A+ PE         LI   +   +PL    ATAL  ++K
Sbjct: 240 IGYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPL----ATALIDEIK 293