Pairwise Alignments

Query, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (455), Expect = 4e-50
 Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 10/251 (3%)

Query: 1   MKKLVLLGALALSVLSMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEE 60
           MKK++L   + L   S  A  E   +K  +EA Y PF     +  I GFD D+ NALC++
Sbjct: 1   MKKILLASLIGLVSASAAAQQE---IKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQ 57

Query: 61  MKVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEGT 120
           ++ KC++  Q FD LIPALK ++ DA +S+M IT+ R + V+F+N YY   A  V   G 
Sbjct: 58  LEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK 117

Query: 121 AVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTVA 180
               +   LKGK++GVQ GS H  F  E L+      VPYSS  + ++D++ GR+D    
Sbjct: 118 VADQA--ALKGKRVGVQNGSTHQSFLLEQLS--DVVAVPYSSYQDAFIDMKNGRIDSVFG 173

Query: 181 DATLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIRAN 240
           D  ++ E F         A+ G   T+A+YFG+G GIAV K ++  LD++NAA+ A++ N
Sbjct: 174 DTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKEN 230

Query: 241 GKYKEIEKKYF 251
           G+Y  I  KYF
Sbjct: 231 GEYAAIFNKYF 241